Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL035423.1-201ENST00000420331 213 ntBASIC3.41□□□□□ -1.86
PROM1O43490 PGBD4P6-201ENST00000421501 610 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.41□□□□□ -1.86
PROM1O43490 NDUFB4P7-201ENST00000423198 363 ntBASIC3.41□□□□□ -1.86
PROM1O43490 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.41□□□□□ -1.86
PROM1O43490 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.41□□□□□ -1.86
PROM1O43490 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.41□□□□□ -1.86
PROM1O43490 AL590664.1-201ENST00000448065 339 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RPS3AP46-201ENST00000448352 682 ntBASIC3.41□□□□□ -1.86
PROM1O43490 CECR9-201ENST00000453421 199 ntBASIC3.41□□□□□ -1.86
PROM1O43490 FABP5P15-201ENST00000453566 214 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AL583843.1-201ENST00000456070 346 ntBASIC3.41□□□□□ -1.86
PROM1O43490 SNORA59A-201ENST00000459326 152 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AC068781.1-201ENST00000488231 618 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AC015911.1-201ENST00000495111 156 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AC010265.1-201ENST00000513509 211 ntBASIC3.41□□□□□ -1.86
PROM1O43490 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.41□□□□□ -1.86
PROM1O43490 AC008269.2-201ENST00000561915 1105 ntBASIC3.41□□□□□ -1.86
PROM1O43490 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.41□□□□□ -1.86
PROM1O43490 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.41□□□□□ -1.86
PROM1O43490 RNU6-6P-201ENST00000606623 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AC090132.2-201ENST00000615881 347 ntBASIC3.41□□□□□ -1.86
PROM1O43490 RMST_4.1-201ENST00000616886 107 ntBASIC3.41□□□□□ -1.86
PROM1O43490 AC092628.2-201ENST00000622492 339 ntBASIC3.41□□□□□ -1.86
PROM1O43490 U6.105-201ENST00000637379 88 ntBASIC3.41□□□□□ -1.86
PROM1O43490 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PROM1O43490 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PROM1O43490 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.41□□□□□ -1.86
PROM1O43490 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PROM1O43490 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.41□□□□□ -1.86
PROM1O43490 AC073073.2-201ENST00000609827 2578 ntBASIC3.41□□□□□ -1.86
PROM1O43490 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
PROM1O43490 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PROM1O43490 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PROM1O43490 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PROM1O43490 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
PROM1O43490 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
PROM1O43490 RNU6-741P-201ENST00000383889 107 ntBASIC3.4□□□□□ -1.87
PROM1O43490 NDUFB4P4-201ENST00000404822 243 ntBASIC3.4□□□□□ -1.87
PROM1O43490 RNU2-33P-201ENST00000410344 192 ntBASIC3.4□□□□□ -1.87
PROM1O43490 RNU6-325P-201ENST00000411132 105 ntBASIC3.4□□□□□ -1.87
PROM1O43490 Z92545.1-201ENST00000411782 234 ntBASIC3.4□□□□□ -1.87
PROM1O43490 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC243428.1-201ENST00000421099 264 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.4□□□□□ -1.87
PROM1O43490 TMEM167AP1-201ENST00000423409 219 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC007560.1-201ENST00000426912 237 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC093151.1-201ENST00000427711 313 ntBASIC3.4□□□□□ -1.87
PROM1O43490 RPL21P40-201ENST00000428586 483 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AL133396.1-201ENST00000432048 687 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AL353997.1-201ENST00000432936 108 ntBASIC3.4□□□□□ -1.87
PROM1O43490 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.4□□□□□ -1.87
PROM1O43490 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.4□□□□□ -1.87
PROM1O43490 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.4□□□□□ -1.87
PROM1O43490 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC113155.1-201ENST00000511141 769 ntBASIC3.4□□□□□ -1.87
PROM1O43490 ACA59.1-201ENST00000515966 143 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC025755.1-201ENST00000521306 278 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AL117187.1-201ENST00000555482 181 ntBASIC3.4□□□□□ -1.87
PROM1O43490 HMGB1P14-201ENST00000557424 591 ntBASIC3.4□□□□□ -1.87
PROM1O43490 MIR4273-201ENST00000582824 84 ntBASIC3.4□□□□□ -1.87
PROM1O43490 MIR5195-201ENST00000583555 115 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC011471.1-201ENST00000585766 187 ntBASIC3.4□□□□□ -1.87
PROM1O43490 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.4□□□□□ -1.87
PROM1O43490 AC092447.9-201ENST00000603395 144 ntBASIC3.4□□□□□ -1.87
PROM1O43490 U3.45-201ENST00000607547 219 ntBASIC3.4□□□□□ -1.87
PROM1O43490 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.4□□□□□ -1.87
PROM1O43490 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PROM1O43490 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PROM1O43490 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PROM1O43490 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.4□□□□□ -1.87
PROM1O43490 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
PROM1O43490 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PROM1O43490 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PROM1O43490 AC058791.1-201ENST00000608412 3198 ntBASIC3.39□□□□□ -1.87
PROM1O43490 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PROM1O43490 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
PROM1O43490 Y_RNA.48-201ENST00000362710 103 ntBASIC3.39□□□□□ -1.87
PROM1O43490 MIR493-201ENST00000385254 89 ntBASIC3.39□□□□□ -1.87
PROM1O43490 RNU1-101P-201ENST00000391171 127 ntBASIC3.39□□□□□ -1.87
PROM1O43490 U3.39-201ENST00000408569 239 ntBASIC3.39□□□□□ -1.87
PROM1O43490 AL592148.1-201ENST00000413568 445 ntBASIC3.39□□□□□ -1.87
PROM1O43490 BX276092.3-201ENST00000424182 230 ntBASIC3.39□□□□□ -1.87
PROM1O43490 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.39□□□□□ -1.87
PROM1O43490 AC096644.2-201ENST00000429278 159 ntBASIC3.39□□□□□ -1.87
PROM1O43490 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
PROM1O43490 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.39□□□□□ -1.87
PROM1O43490 RN7SL293P-201ENST00000481765 281 ntBASIC3.39□□□□□ -1.87
PROM1O43490 RPL30P14-201ENST00000482744 348 ntBASIC3.39□□□□□ -1.87
PROM1O43490 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.39□□□□□ -1.87
PROM1O43490 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.39□□□□□ -1.87
PROM1O43490 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.39□□□□□ -1.87
PROM1O43490 COX6CP5-201ENST00000527162 228 ntBASIC3.39□□□□□ -1.87
PROM1O43490 TRAV32-201ENST00000553993 340 ntBASIC3.39□□□□□ -1.87
PROM1O43490 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.39□□□□□ -1.87
PROM1O43490 MIR3976-201ENST00000606807 139 ntBASIC3.39□□□□□ -1.87
PROM1O43490 AL591516.1-201ENST00000611326 274 ntBASIC3.39□□□□□ -1.87
PROM1O43490 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.39□□□□□ -1.87
PROM1O43490 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms