Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNA5SP219-201ENST00000390940 113 ntBASIC2.66□□□□□ -1.98
TO15178 UBA52P6-201ENST00000399822 382 ntBASIC2.66□□□□□ -1.98
TO15178 AL139095.1-201ENST00000404326 391 ntBASIC2.66□□□□□ -1.98
TO15178 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
TO15178 RNU6-373P-201ENST00000411247 98 ntBASIC2.66□□□□□ -1.98
TO15178 POLHP1-201ENST00000411806 470 ntBASIC2.66□□□□□ -1.98
TO15178 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.66□□□□□ -1.98
TO15178 PTGES3P4-201ENST00000426243 356 ntBASIC2.66□□□□□ -1.98
TO15178 ERLEC1P1-201ENST00000433806 578 ntBASIC2.66□□□□□ -1.98
TO15178 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.66□□□□□ -1.98
TO15178 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.66□□□□□ -1.98
TO15178 FGF7P6-202ENST00000451282 293 ntBASIC2.66□□□□□ -1.98
TO15178 AL441985.1-201ENST00000457727 251 ntBASIC2.66□□□□□ -1.98
TO15178 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.66□□□□□ -1.98
TO15178 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.66□□□□□ -1.98
TO15178 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
TO15178 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.66□□□□□ -1.98
TO15178 Y_RNA.654-201ENST00000497848 106 ntBASIC2.66□□□□□ -1.98
TO15178 HIGD1AP13-201ENST00000509878 289 ntBASIC2.66□□□□□ -1.98
TO15178 AC114781.4-201ENST00000513707 639 ntBASIC2.66□□□□□ -1.98
TO15178 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.66□□□□□ -1.98
TO15178 RNU6-189P-201ENST00000516120 101 ntBASIC2.66□□□□□ -1.98
TO15178 AC069113.1-201ENST00000517763 267 ntBASIC2.66□□□□□ -1.98
TO15178 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.66□□□□□ -1.98
TO15178 AP004607.1-201ENST00000524456 203 ntBASIC2.66□□□□□ -1.98
TO15178 AC090115.3-201ENST00000553218 849 ntBASIC2.66□□□□□ -1.98
TO15178 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.66□□□□□ -1.98
TO15178 AC023043.3-201ENST00000593113 385 ntBASIC2.66□□□□□ -1.98
TO15178 AL391813.1-201ENST00000603098 260 ntBASIC2.66□□□□□ -1.98
TO15178 AC091152.3-201ENST00000604227 325 ntBASIC2.66□□□□□ -1.98
TO15178 AC005000.2-201ENST00000605468 310 ntBASIC2.66□□□□□ -1.98
TO15178 AC104458.1-201ENST00000608243 463 ntBASIC2.66□□□□□ -1.98
TO15178 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
TO15178 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.66□□□□□ -1.98
TO15178 AC091953.5-201ENST00000622919 233 ntBASIC2.66□□□□□ -1.98
TO15178 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.66□□□□□ -1.98
TO15178 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TO15178 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
TO15178 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TO15178 Y_RNA.256-201ENST00000364594 104 ntBASIC2.65□□□□□ -1.99
TO15178 MIR128-1-201ENST00000384921 82 ntBASIC2.65□□□□□ -1.99
TO15178 MIR23A-201ENST00000385245 73 ntBASIC2.65□□□□□ -1.99
TO15178 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.65□□□□□ -1.99
TO15178 EEF1A1P41-201ENST00000414667 207 ntBASIC2.65□□□□□ -1.99
TO15178 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.65□□□□□ -1.99
TO15178 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.65□□□□□ -1.99
TO15178 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.65□□□□□ -1.99
TO15178 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.65□□□□□ -1.99
TO15178 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.65□□□□□ -1.99
TO15178 GZMAP1-201ENST00000503054 631 ntBASIC2.65□□□□□ -1.99
TO15178 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.65□□□□□ -1.99
TO15178 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.65□□□□□ -1.99
TO15178 RNU6-1038P-201ENST00000516516 104 ntBASIC2.65□□□□□ -1.99
TO15178 Y_RNA.687-201ENST00000516558 91 ntBASIC2.65□□□□□ -1.99
TO15178 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.65□□□□□ -1.99
TO15178 CYCSP27-201ENST00000527643 293 ntBASIC2.65□□□□□ -1.99
TO15178 SNORA59B-202ENST00000578183 701 ntBASIC2.65□□□□□ -1.99
TO15178 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
TO15178 AC024153.1-201ENST00000603103 365 ntBASIC2.65□□□□□ -1.99
TO15178 AP000907.4-201ENST00000604143 237 ntBASIC2.65□□□□□ -1.99
TO15178 RNU6-89P-201ENST00000606519 100 ntBASIC2.65□□□□□ -1.99
TO15178 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.65□□□□□ -1.99
TO15178 AC024614.3-201ENST00000637860 256 ntBASIC2.65□□□□□ -1.99
TO15178 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
TO15178 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TO15178 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.65□□□□□ -1.99
TO15178 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TO15178 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
TO15178 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.64□□□□□ -1.99
TO15178 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TO15178 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
TO15178 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.64□□□□□ -1.99
TO15178 RNU6-266P-201ENST00000364225 107 ntBASIC2.64□□□□□ -1.99
TO15178 Y_RNA.378-201ENST00000365652 113 ntBASIC2.64□□□□□ -1.99
TO15178 MIR512-1-201ENST00000384913 84 ntBASIC2.64□□□□□ -1.99
TO15178 AL512633.1-201ENST00000399931 655 ntBASIC2.64□□□□□ -1.99
TO15178 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.64□□□□□ -1.99
TO15178 RNU4-26P-201ENST00000410270 107 ntBASIC2.64□□□□□ -1.99
TO15178 RNA5SP118-201ENST00000410385 109 ntBASIC2.64□□□□□ -1.99
TO15178 RPLP0P7-201ENST00000416050 667 ntBASIC2.64□□□□□ -1.99
TO15178 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.64□□□□□ -1.99
TO15178 SRIP2-201ENST00000428470 166 ntBASIC2.64□□□□□ -1.99
TO15178 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
TO15178 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.64□□□□□ -1.99
TO15178 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.64□□□□□ -1.99
TO15178 RNU6-1208P-201ENST00000459588 107 ntBASIC2.64□□□□□ -1.99
TO15178 AP004217.1-201ENST00000480579 346 ntBASIC2.64□□□□□ -1.99
TO15178 ACA59.2-201ENST00000517061 156 ntBASIC2.64□□□□□ -1.99
TO15178 SNORA25.17-201ENST00000517184 124 ntBASIC2.64□□□□□ -1.99
TO15178 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.64□□□□□ -1.99
TO15178 AC078814.3-201ENST00000553036 491 ntBASIC2.64□□□□□ -1.99
TO15178 AL118558.2-201ENST00000556294 238 ntBASIC2.64□□□□□ -1.99
TO15178 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TO15178 MIR3616-201ENST00000584070 92 ntBASIC2.64□□□□□ -1.99
TO15178 VN1R80P-201ENST00000597126 338 ntBASIC2.64□□□□□ -1.99
TO15178 AC092747.3-201ENST00000603769 301 ntBASIC2.64□□□□□ -1.99
TO15178 AC002044.1-201ENST00000606707 158 ntBASIC2.64□□□□□ -1.99
TO15178 AC092807.2-201ENST00000609367 243 ntBASIC2.64□□□□□ -1.99
TO15178 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TO15178 AC002553.4-201ENST00000616896 331 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms