Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX4O14627 MTATP6P16-201ENST00000434543 526 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX4O14627 RPL21P2-201ENST00000440049 481 ntBASIC2.28□□□□□ -2.04
CDX4O14627 FABP5P13-201ENST00000452144 328 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 AC006512.1-201ENST00000468816 291 ntBASIC2.28□□□□□ -2.04
CDX4O14627 RN7SL499P-201ENST00000481141 276 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 RNU6-1281P-201ENST00000516223 105 ntBASIC2.28□□□□□ -2.04
CDX4O14627 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 AC109635.3-201ENST00000529536 185 ntBASIC2.28□□□□□ -2.04
CDX4O14627 OR4R1P-201ENST00000529879 463 ntBASIC2.28□□□□□ -2.04
CDX4O14627 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
CDX4O14627 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.28□□□□□ -2.04
CDX4O14627 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 AL359212.1-201ENST00000556608 614 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX4O14627 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX4O14627 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX4O14627 AC005498.1-201ENST00000592125 465 ntBASIC2.28□□□□□ -2.04
CDX4O14627 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.28□□□□□ -2.04
CDX4O14627 AC002553.4-201ENST00000616896 331 ntBASIC2.28□□□□□ -2.04
CDX4O14627 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.28□□□□□ -2.04
CDX4O14627 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX4O14627 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CDX4O14627 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
CDX4O14627 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
CDX4O14627 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.28□□□□□ -2.05
CDX4O14627 AC026241.1-201ENST00000517873 2142 ntBASIC2.27□□□□□ -2.05
CDX4O14627 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDX4O14627 RNU6-1322P-201ENST00000364309 107 ntBASIC2.27□□□□□ -2.05
CDX4O14627 RNU6-534P-201ENST00000364877 106 ntBASIC2.27□□□□□ -2.05
CDX4O14627 Y_RNA.303-201ENST00000364998 94 ntBASIC2.27□□□□□ -2.05
CDX4O14627 Y_RNA.367-201ENST00000365544 101 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AL139397.2-201ENST00000404529 772 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC114491.1-201ENST00000416095 246 ntBASIC2.27□□□□□ -2.05
CDX4O14627 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDX4O14627 GTF2IP20-201ENST00000431663 360 ntBASIC2.27□□□□□ -2.05
CDX4O14627 HMGB1P31-201ENST00000437242 427 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX4O14627 DPPA3P1-201ENST00000448050 469 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX4O14627 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX4O14627 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX4O14627 MRPS17P3-201ENST00000465453 385 ntBASIC2.27□□□□□ -2.05
CDX4O14627 RPL31P58-201ENST00000469001 379 ntBASIC2.27□□□□□ -2.05
CDX4O14627 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX4O14627 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX4O14627 PRDX4P1-201ENST00000507189 574 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC022634.1-201ENST00000520765 532 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX4O14627 ADI1P3-201ENST00000549509 470 ntBASIC2.27□□□□□ -2.05
CDX4O14627 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
CDX4O14627 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC019159.1-201ENST00000605094 187 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC022893.3-201ENST00000607665 437 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AL359198.2-201ENST00000611836 194 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AL355073.2-201ENST00000612106 557 ntBASIC2.27□□□□□ -2.05
CDX4O14627 UCA1.1-201ENST00000620952 75 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AC093648.1-201ENST00000623546 606 ntBASIC2.27□□□□□ -2.05
CDX4O14627 AL512643.1-201ENST00000635735 524 ntBASIC2.27□□□□□ -2.05
CDX4O14627 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX4O14627 Y_RNA.88-201ENST00000363029 99 ntBASIC2.26□□□□□ -2.05
CDX4O14627 RNU6-179P-201ENST00000363350 107 ntBASIC2.26□□□□□ -2.05
CDX4O14627 SNORA69-201ENST00000383895 132 ntBASIC2.26□□□□□ -2.05
CDX4O14627 SNORA67.3-201ENST00000384366 140 ntBASIC2.26□□□□□ -2.05
CDX4O14627 Y_RNA.481-201ENST00000384373 102 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AL078595.1-201ENST00000404458 226 ntBASIC2.26□□□□□ -2.05
CDX4O14627 RNU6-908P-201ENST00000410160 94 ntBASIC2.26□□□□□ -2.05
CDX4O14627 RNU6-193P-201ENST00000410977 107 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AC022028.1-201ENST00000412054 408 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.26□□□□□ -2.05
CDX4O14627 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 AL365496.1-201ENST00000426885 215 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX4O14627 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.26□□□□□ -2.05
CDX4O14627 AL592045.1-201ENST00000429867 352 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AL591704.1-201ENST00000432574 275 ntBASIC2.26□□□□□ -2.05
CDX4O14627 MRPL50P4-201ENST00000446432 475 ntBASIC2.26□□□□□ -2.05
CDX4O14627 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 MTATP6P7-201ENST00000453315 681 ntBASIC2.26□□□□□ -2.05
CDX4O14627 RPL23AP11-201ENST00000475260 469 ntBASIC2.26□□□□□ -2.05
CDX4O14627 SEM1P1-201ENST00000506694 209 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AC108078.2-201ENST00000510750 236 ntBASIC2.26□□□□□ -2.05
CDX4O14627 RNA5SP401-201ENST00000515920 127 ntBASIC2.26□□□□□ -2.05
CDX4O14627 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.26□□□□□ -2.05
CDX4O14627 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.26□□□□□ -2.05
CDX4O14627 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.26□□□□□ -2.05
CDX4O14627 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms