Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RNU6-1281P-201ENST00000516223 105 ntBASIC2.62□□□□□ -1.99
O00370 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
O00370 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.62□□□□□ -1.99
O00370 AK6P1-201ENST00000540219 478 ntBASIC2.62□□□□□ -1.99
O00370 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.62□□□□□ -1.99
O00370 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.62□□□□□ -1.99
O00370 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.62□□□□□ -1.99
O00370 MIR5692A1-201ENST00000580523 69 ntBASIC2.62□□□□□ -1.99
O00370 U6.42-201ENST00000618440 107 ntBASIC2.62□□□□□ -1.99
O00370 U2.21-201ENST00000637295 81 ntBASIC2.62□□□□□ -1.99
O00370 AC068137.3-201ENST00000639191 341 ntBASIC2.62□□□□□ -1.99
O00370 AC073869.6-201ENST00000640656 341 ntBASIC2.62□□□□□ -1.99
O00370 AC069528.2-201ENST00000624849 1991 ntBASIC2.61□□□□□ -1.99
O00370 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
O00370 AL354685.2-201ENST00000448218 1447 ntBASIC2.61□□□□□ -1.99
O00370 AC006020.1-201ENST00000420179 1854 ntBASIC2.61□□□□□ -1.99
O00370 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
O00370 RNA5SP126-201ENST00000365092 109 ntBASIC2.61□□□□□ -1.99
O00370 SNORA69-201ENST00000383895 132 ntBASIC2.61□□□□□ -1.99
O00370 MIR10A-201ENST00000385043 110 ntBASIC2.61□□□□□ -1.99
O00370 RNU6-903P-201ENST00000391270 109 ntBASIC2.61□□□□□ -1.99
O00370 AL162578.1-201ENST00000406202 378 ntBASIC2.61□□□□□ -1.99
O00370 MIR548F1-201ENST00000408667 84 ntBASIC2.61□□□□□ -1.99
O00370 Y_RNA.619-201ENST00000410951 90 ntBASIC2.61□□□□□ -1.99
O00370 AL031779.1-201ENST00000415663 330 ntBASIC2.61□□□□□ -1.99
O00370 BPY2DP-201ENST00000422208 265 ntBASIC2.61□□□□□ -1.99
O00370 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
O00370 AC073415.1-201ENST00000449240 153 ntBASIC2.61□□□□□ -1.99
O00370 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.61□□□□□ -1.99
O00370 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.61□□□□□ -1.99
O00370 AC092001.1-201ENST00000453012 261 ntBASIC2.61□□□□□ -1.99
O00370 snoU109.2-201ENST00000459316 135 ntBASIC2.61□□□□□ -1.99
O00370 GMFBP1-201ENST00000467831 427 ntBASIC2.61□□□□□ -1.99
O00370 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
O00370 AL163973.1-201ENST00000484753 577 ntBASIC2.61□□□□□ -1.99
O00370 FAM92A1P2-202ENST00000504766 877 ntBASIC2.61□□□□□ -1.99
O00370 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
O00370 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
O00370 AC105417.1-201ENST00000514691 285 ntBASIC2.61□□□□□ -1.99
O00370 RNU6-718P-201ENST00000516166 105 ntBASIC2.61□□□□□ -1.99
O00370 RNU6-581P-201ENST00000516214 105 ntBASIC2.61□□□□□ -1.99
O00370 RN7SKP219-201ENST00000516825 296 ntBASIC2.61□□□□□ -1.99
O00370 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.61□□□□□ -1.99
O00370 AC104383.1-201ENST00000530297 370 ntBASIC2.61□□□□□ -1.99
O00370 AP003034.1-201ENST00000534621 422 ntBASIC2.61□□□□□ -1.99
O00370 AL121821.2-201ENST00000556081 394 ntBASIC2.61□□□□□ -1.99
O00370 AC027176.1-201ENST00000560204 514 ntBASIC2.61□□□□□ -1.99
O00370 AC025678.1-201ENST00000567861 338 ntBASIC2.61□□□□□ -1.99
O00370 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
O00370 AP001330.5-201ENST00000607176 411 ntBASIC2.61□□□□□ -1.99
O00370 AC017083.3-201ENST00000609955 700 ntBASIC2.61□□□□□ -1.99
O00370 HMGB1P24-202ENST00000615653 685 ntBASIC2.61□□□□□ -1.99
O00370 AC005609.4-201ENST00000625071 447 ntBASIC2.61□□□□□ -1.99
O00370 AC080128.1-201ENST00000474389 1917 ntBASIC2.61□□□□□ -1.99
O00370 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
O00370 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
O00370 AC010889.1-201ENST00000566193 2666 ntBASIC2.6□□□□□ -1.99
O00370 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
O00370 AC110491.1-201ENST00000562191 2010 ntBASIC2.6□□□□□ -1.99
O00370 ELF2P3-201ENST00000445099 1506 ntBASIC2.6□□□□□ -1.99
O00370 Y_RNA.255-201ENST00000364581 97 ntBASIC2.6□□□□□ -1.99
O00370 RNU6-1303P-201ENST00000364841 107 ntBASIC2.6□□□□□ -1.99
O00370 RNU6-483P-201ENST00000384088 108 ntBASIC2.6□□□□□ -1.99
O00370 SNORA80E-201ENST00000384744 137 ntBASIC2.6□□□□□ -1.99
O00370 AL359511.1-201ENST00000402970 211 ntBASIC2.6□□□□□ -1.99
O00370 RNU2-29P-201ENST00000410423 189 ntBASIC2.6□□□□□ -1.99
O00370 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.6□□□□□ -1.99
O00370 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.6□□□□□ -1.99
O00370 AC096649.2-201ENST00000416186 393 ntBASIC2.6□□□□□ -1.99
O00370 AC009963.1-201ENST00000417265 157 ntBASIC2.6□□□□□ -1.99
O00370 USP9YP27-201ENST00000418455 438 ntBASIC2.6□□□□□ -1.99
O00370 PGBD4P6-201ENST00000421501 610 ntBASIC2.6□□□□□ -1.99
O00370 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.6□□□□□ -1.99
O00370 TOMM20P4-201ENST00000427861 435 ntBASIC2.6□□□□□ -1.99
O00370 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.6□□□□□ -1.99
O00370 HMGB1P9-201ENST00000429856 646 ntBASIC2.6□□□□□ -1.99
O00370 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.6□□□□□ -1.99
O00370 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.6□□□□□ -1.99
O00370 AL360271.2-201ENST00000447710 161 ntBASIC2.6□□□□□ -1.99
O00370 BTF3P15-201ENST00000455606 336 ntBASIC2.6□□□□□ -1.99
O00370 AL121769.1-201ENST00000469473 401 ntBASIC2.6□□□□□ -1.99
O00370 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.6□□□□□ -1.99
O00370 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.6□□□□□ -1.99
O00370 AC019235.1-201ENST00000503847 207 ntBASIC2.6□□□□□ -1.99
O00370 MTCO3P9-201ENST00000506989 781 ntBASIC2.6□□□□□ -1.99
O00370 AC023141.11-201ENST00000508864 202 ntBASIC2.6□□□□□ -1.99
O00370 MTND3P25-201ENST00000509243 135 ntBASIC2.6□□□□□ -1.99
O00370 SNORA40.12-201ENST00000516329 111 ntBASIC2.6□□□□□ -1.99
O00370 Y_RNA.693-201ENST00000516641 110 ntBASIC2.6□□□□□ -1.99
O00370 BTF3P12-201ENST00000519620 469 ntBASIC2.6□□□□□ -1.99
O00370 AC109329.2-201ENST00000519658 482 ntBASIC2.6□□□□□ -1.99
O00370 AP005435.4-201ENST00000529514 284 ntBASIC2.6□□□□□ -1.99
O00370 HMGB1P33-201ENST00000563485 527 ntBASIC2.6□□□□□ -1.99
O00370 AC023824.2-201ENST00000566185 400 ntBASIC2.6□□□□□ -1.99
O00370 AL021997.1-201ENST00000605757 193 ntBASIC2.6□□□□□ -1.99
O00370 AC243829.7-201ENST00000633081 225 ntBASIC2.6□□□□□ -1.99
O00370 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
O00370 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
O00370 MTND4P27-201ENST00000450813 1354 ntBASIC2.6□□□□□ -1.99
O00370 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms