Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.98□□□□□ -1.77
RFXAPO00287 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFXAPO00287 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
RFXAPO00287 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 AL606537.1-201ENST00000607258 2011 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
RFXAPO00287 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 RNU6-1290P-201ENST00000362957 109 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RNU6-1155P-201ENST00000363554 107 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RNU6-827P-201ENST00000365553 106 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.97□□□□□ -1.77
RFXAPO00287 MTCYBP2-201ENST00000407745 171 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RNU6-603P-201ENST00000411403 107 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 TMEM167AP1-201ENST00000423409 219 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 CYCSP4-201ENST00000429682 331 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 SNORD105B-201ENST00000458770 79 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RPL21P104-201ENST00000464143 478 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 AC091021.1-201ENST00000468051 388 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 RPL7P47-201ENST00000497299 556 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RNU2-27P-201ENST00000516185 142 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 RNA5SP471-201ENST00000516971 106 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 SNORA31.22-201ENST00000517204 135 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.97□□□□□ -1.77
RFXAPO00287 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.97□□□□□ -1.77
RFXAPO00287 EIF4BP1-201ENST00000554881 351 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 GNRHR2P1-201ENST00000555315 631 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 AL139395.1-201ENST00000603662 160 ntBASIC3.97□□□□□ -1.77
RFXAPO00287 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.97□□□□□ -1.77
RFXAPO00287 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.97□□□□□ -1.77
RFXAPO00287 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RFXAPO00287 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.97□□□□□ -1.77
RFXAPO00287 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFXAPO00287 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
RFXAPO00287 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.77
RFXAPO00287 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.96□□□□□ -1.78
RFXAPO00287 RNU6-384P-201ENST00000364900 104 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 RNU6-81P-201ENST00000365608 104 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 Y_RNA.398-201ENST00000383952 99 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 MIR199A2-201ENST00000385289 110 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RFXAPO00287 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RFXAPO00287 RNA5SP56-201ENST00000410277 118 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 RNU6-735P-201ENST00000410612 107 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 HMGB1P37-201ENST00000439613 609 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
RFXAPO00287 RNU7-87P-201ENST00000459343 62 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.96□□□□□ -1.78
RFXAPO00287 RPL30P10-201ENST00000488148 337 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.96□□□□□ -1.78
RFXAPO00287 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.96□□□□□ -1.78
RFXAPO00287 MRPS36P4-201ENST00000534436 298 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.96□□□□□ -1.78
RFXAPO00287 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.96□□□□□ -1.78
RFXAPO00287 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.96□□□□□ -1.78
RFXAPO00287 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 AC011921.3-201ENST00000605540 361 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 MIR7112-201ENST00000616126 65 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 AC006386.2-201ENST00000624491 75 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 AC012005.1-201ENST00000624575 75 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RFXAPO00287 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RFXAPO00287 NOL8P1-201ENST00000508336 3529 ntBASIC3.96□□□□□ -1.78
RFXAPO00287 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFXAPO00287 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.96□□□□□ -1.78
RFXAPO00287 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFXAPO00287 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFXAPO00287 Y_RNA.286-201ENST00000364813 102 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 RNY4P28-201ENST00000365281 93 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 Y_RNA.405-201ENST00000383979 100 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 Y_RNA.451-201ENST00000384200 100 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 Y_RNA.524-201ENST00000384564 100 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 Y_RNA.561-201ENST00000384694 100 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 MIR708-201ENST00000390708 88 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 DBIP2-201ENST00000419076 262 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.95□□□□□ -1.78
RFXAPO00287 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 RN7SL271P-201ENST00000487601 295 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 RAC1P2-201ENST00000511164 579 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 RNA5SP164-201ENST00000516533 110 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 AC008694.2-201ENST00000517591 306 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.95□□□□□ -1.78
RFXAPO00287 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.95□□□□□ -1.78
RFXAPO00287 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.95□□□□□ -1.78
RFXAPO00287 AC008962.1-201ENST00000605729 304 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 SNORA62.6-201ENST00000606322 83 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 AC107294.1-201ENST00000609524 467 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 AC240442.1-201ENST00000616055 283 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 RMST_4.1-201ENST00000616886 107 ntBASIC3.95□□□□□ -1.78
RFXAPO00287 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFXAPO00287 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFXAPO00287 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RFXAPO00287 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.95□□□□□ -1.78
RFXAPO00287 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms