Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-581P-201ENST00000516214 105 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU1-107P-201ENST00000516617 154 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU1-104P-201ENST00000517280 175 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC135279.1-201ENST00000543493 504 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL121821.2-201ENST00000556081 394 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR1273D-201ENST00000577266 86 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR4648-201ENST00000580107 72 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR5007-201ENST00000583098 95 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC073539.2-201ENST00000597113 165 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL355877.2-201ENST00000603670 358 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL645944.1-201ENST00000603857 493 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL138889.2-201ENST00000603883 242 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC008945.2-201ENST00000606056 604 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AP001596.2-201ENST00000608410 312 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC011890.2-201ENST00000613393 294 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 uc_338.11-201ENST00000619132 160 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC010378.1-201ENST00000619270 362 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC068792.1-201ENST00000621354 417 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 ADAM3A-203ENST00000461344 2157 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.381-201ENST00000365666 102 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-903P-201ENST00000391270 109 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 CALM2P3-201ENST00000400429 449 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AL591416.1-201ENST00000404015 867 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AL353621.1-201ENST00000418219 243 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AL161651.1-201ENST00000440882 223 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC091435.1-201ENST00000505442 584 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 SNORD19.2-201ENST00000516978 73 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC022880.1-201ENST00000534017 973 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AP003034.1-201ENST00000534621 422 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC025678.1-201ENST00000567861 338 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC007151.1-201ENST00000572774 483 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AP001330.5-201ENST00000607176 411 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC008536.2-201ENST00000607284 349 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AL158209.2-201ENST00000619266 216 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR6863-201ENST00000636112 90 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AC068137.4-201ENST00000638485 296 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 Z82209.1-201ENST00000422141 2135 ntBASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NEDD8-MDP1E9PL57 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 SNORD14B-201ENST00000364533 90 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.409-201ENST00000383990 98 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1179P-201ENST00000384667 107 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AL513475.1-201ENST00000406602 315 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 RNA5SP181-201ENST00000410246 98 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1328P-201ENST00000410938 106 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC016831.2-201ENST00000417179 352 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AL627311.1-201ENST00000431514 115 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AL606489.2-201ENST00000433886 234 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC009296.1-201ENST00000443146 155 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC096638.1-201ENST00000444678 216 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 OSTCP8-201ENST00000445117 448 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC092001.1-201ENST00000453012 261 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC233279.1-201ENST00000455300 423 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 GMFBP1-201ENST00000467831 427 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC116655.1-201ENST00000508324 901 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 MTND3P25-201ENST00000509243 135 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC104383.1-201ENST00000530297 370 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC092325.1-201ENST00000566449 554 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC087045.1-201ENST00000605856 382 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 AC015540.1-201ENST00000615828 501 ntBASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.34□□□□□ -2.03
NEDD8-MDP1E9PL57 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
NEDD8-MDP1E9PL57 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.34□□□□□ -2.04
NEDD8-MDP1E9PL57 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms