Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC090971.5-201ENST00000621102 293 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AC110079.1-202ENST00000635213 138 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 AL732372.2-225ENST00000642124 456 ntBASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
MBD3L4A6NDZ8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 MTND5P19-201ENST00000424872 1794 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-227P-201ENST00000362865 103 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-43P-201ENST00000384302 107 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-843P-201ENST00000384454 104 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-748P-201ENST00000384648 107 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-1011P-201ENST00000384668 107 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 BTF3L4P2-201ENST00000392798 346 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AL159169.1-201ENST00000421119 127 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 MTCO2P12-201ENST00000427426 682 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RPL21P40-201ENST00000428586 483 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RPL23AP50-201ENST00000434149 455 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU7-152P-201ENST00000458982 64 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 SNRPGP7-201ENST00000469016 106 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC027575.1-201ENST00000481064 460 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC093663.1-201ENST00000497190 394 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC097473.1-201ENST00000508142 408 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC005741.1-201ENST00000511094 432 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RNU6-307P-201ENST00000516743 106 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 SNORA31.23-201ENST00000517219 133 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 RN7SKP57-201ENST00000517248 293 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC009812.2-201ENST00000517657 457 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 DNAJC8P1-201ENST00000554535 372 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 MTCO3P13-201ENST00000577757 781 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 MIR4273-201ENST00000582824 84 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 AC006077.1-201ENST00000604746 343 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 BRDTP1-201ENST00000605735 677 ntBASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MBD3L4A6NDZ8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
MBD3L4A6NDZ8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.15□□□□□ -1.9
MBD3L4A6NDZ8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
MBD3L4A6NDZ8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MBD3L4A6NDZ8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
MBD3L4A6NDZ8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-890P-201ENST00000384121 107 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RNU6-331P-201ENST00000384724 107 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AL133475.1-201ENST00000404414 305 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AL138878.1-201ENST00000405131 347 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RN7SKP111-201ENST00000410349 271 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RNA5SP39-201ENST00000411245 120 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC009414.1-201ENST00000427200 443 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC243964.1-201ENST00000441814 261 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 ELOCP24-201ENST00000456370 334 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RN7SL601P-201ENST00000471221 293 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 FO393415.2-201ENST00000480085 343 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RPS26P15-201ENST00000488067 348 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 SCARNA16.2-201ENST00000516520 172 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC093249.1-201ENST00000567049 203 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC103858.2-201ENST00000621471 543 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 AC092608.2-201ENST00000624427 218 ntBASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MBD3L4A6NDZ8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 MTND5P10-201ENST00000603719 1809 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 MFSD8-233ENST00000641482 4860 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 Y_RNA.187-201ENST00000363918 113 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 MIR544A-201ENST00000384855 91 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 U3.39-201ENST00000408569 239 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 RPL31P12-201ENST00000422587 358 ntBASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.14□□□□□ -1.91
MBD3L4A6NDZ8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms