Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNU6-861P-201ENST00000516745 106 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 CYCSP23-201ENST00000519781 313 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 AC011602.1-201ENST00000546484 331 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 AL391261.3-201ENST00000557194 520 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 AC009163.5-201ENST00000575421 637 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 MIR3690-201ENST00000580266 75 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 LINC00901.1-201ENST00000617252 152 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.78□□□□□ -1.8
SHISA3A0PJX4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHISA3A0PJX4 AL109809.4-201ENST00000603520 2185 ntBASIC3.78□□□□□ -1.81
SHISA3A0PJX4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AL590240.1-201ENST00000334118 313 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RNU6-487P-201ENST00000365430 104 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.506-201ENST00000384494 102 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RNA5SP390-201ENST00000410191 113 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RN7SKP100-201ENST00000411258 284 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RPL19P1-201ENST00000411635 428 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 HSPE1P12-201ENST00000412576 301 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RPL23AP36-201ENST00000413895 458 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 HMGN2P10-201ENST00000448085 265 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RPL26P9-201ENST00000457466 433 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 Y_RNA.638-201ENST00000459374 113 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 RPL35AP15-201ENST00000468042 339 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 SNORA27.4-201ENST00000516650 95 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AC008749.1-201ENST00000597650 306 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AC011921.3-201ENST00000605540 361 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 AC125257.1-201ENST00000560400 2930 ntBASIC3.77□□□□□ -1.81
SHISA3A0PJX4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.77□□□□□ -1.81
SHISA3A0PJX4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 RNU6-961P-201ENST00000363893 105 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 RN7SKP280-201ENST00000364196 304 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 SDHCP2-201ENST00000398565 501 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 SNORA3C-201ENST00000408792 125 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 BX510359.2-201ENST00000417920 305 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC244670.1-201ENST00000436879 112 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC012308.1-201ENST00000451232 178 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 SNRPGP7-201ENST00000469016 106 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC109925.1-201ENST00000478069 331 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC091959.1-201ENST00000495857 238 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 MIR4480-201ENST00000582492 71 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC005176.2-201ENST00000596933 147 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AL021997.2-201ENST00000615674 271 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AL590240.4-201ENST00000616908 390 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC087385.3-201ENST00000620477 187 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC132825.6-201ENST00000638861 357 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 AC110491.1-201ENST00000562191 2010 ntBASIC3.76□□□□□ -1.81
SHISA3A0PJX4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHISA3A0PJX4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 FAM35DP-201ENST00000323387 2712 ntBASIC3.75□□□□□ -1.81
SHISA3A0PJX4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.75□□□□□ -1.81
SHISA3A0PJX4 SNORA71.2-201ENST00000364941 134 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms