Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 GABRG2-229ENST00000641017 3628 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-490P-201ENST00000362985 107 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 Y_RNA.252-201ENST00000364556 101 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-790P-201ENST00000384479 105 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 MIR10A-201ENST00000385043 110 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 MIR325-201ENST00000385260 98 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 U3.19-201ENST00000390893 196 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 FTH1P6-201ENST00000430768 320 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RPL23AP50-201ENST00000434149 455 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 PRSS3P4-201ENST00000453323 162 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RN7SKP43-201ENST00000516173 320 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-264P-201ENST00000517134 104 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 Z69720.2-201ENST00000624755 279 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.19□□□□□ -1.9
TCRBV5S1A1TA0A578 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-1059P-201ENST00000363752 98 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-842P-201ENST00000384269 107 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-140P-201ENST00000384566 108 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 SNORA41-201ENST00000384675 132 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNA5SP239-201ENST00000410218 129 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 SNORD56-201ENST00000413522 71 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 NDUFB4P6-201ENST00000436819 366 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 DAP3P1-201ENST00000441522 278 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AL078601.1-201ENST00000444542 271 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC117440.1-201ENST00000474107 571 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 SNORA25.10-201ENST00000515926 124 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 Y_RNA.661-201ENST00000516003 99 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU2-58P-201ENST00000516403 183 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 SCARNA16.2-201ENST00000516520 172 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNA5SP384-201ENST00000516615 116 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 ZNF192P1-203ENST00000565888 810 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC136443.5-201ENST00000603741 370 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 AC084757.4-201ENST00000616350 526 ntBASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TCRBV5S1A1TA0A578 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 PNPT1P2-201ENST00000456768 2050 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-1032P-201ENST00000384100 107 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 Y_RNA.459-201ENST00000384251 102 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-166P-201ENST00000384371 107 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-933P-201ENST00000384424 107 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 MCFD2P1-201ENST00000417812 300 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AL133396.1-201ENST00000432048 687 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AL512844.2-201ENST00000433990 593 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC092573.2-201ENST00000434546 243 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC006028.1-201ENST00000438379 402 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AL031274.1-201ENST00000450334 232 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC092798.1-201ENST00000458542 409 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC022493.2-201ENST00000506122 481 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC113155.1-201ENST00000511141 769 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 ACA59.1-201ENST00000515966 143 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-699P-201ENST00000517081 110 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 TRAV32-201ENST00000553993 340 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC109446.1-201ENST00000566172 220 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 BNIP3P16-201ENST00000589779 534 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms