Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.11□□□□□ -2.07
SMIM28A0A1B0GU29 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-181P-201ENST00000363225 107 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 SNORA67.1-201ENST00000364749 141 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-1072P-201ENST00000384703 107 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-443P-201ENST00000384780 107 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 CIR1P3-201ENST00000405137 479 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-1140P-201ENST00000410517 106 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 PTGES3P4-201ENST00000426243 356 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 C1DP4-201ENST00000455429 424 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RPL23AP42-201ENST00000471152 471 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC011005.2-201ENST00000487324 359 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RPL37P25-201ENST00000507308 276 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-445P-201ENST00000516949 107 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 ACA59.2-201ENST00000517061 156 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC110588.1-201ENST00000559699 137 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC023824.2-201ENST00000566185 400 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 Z84480.1-201ENST00000605131 311 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC244517.12-201ENST00000623581 663 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 AC010329.5-201ENST00000623497 2174 ntBASIC2.1□□□□□ -2.07
SMIM28A0A1B0GU29 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-384P-201ENST00000364900 104 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-9-201ENST00000384000 95 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-3-201ENST00000384287 95 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-7-201ENST00000384404 95 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SNORD116-5-201ENST00000384462 95 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-220P-201ENST00000390919 107 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 Y_RNA.623-201ENST00000411128 95 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 MTCO2P11-201ENST00000431069 680 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC079781.2-201ENST00000446424 169 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RPS29P15-201ENST00000458329 171 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RPL31P3-201ENST00000458430 332 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC116655.1-201ENST00000508324 901 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC079140.3-201ENST00000511111 550 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RNU1-86P-201ENST00000516108 154 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SNORA31.11-201ENST00000516528 139 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RNU1-107P-201ENST00000516617 154 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC015712.3-201ENST00000559380 164 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 MIR4524B-201ENST00000581569 115 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 MIR548AC-201ENST00000585049 88 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC073539.2-201ENST00000597113 165 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC109347.2-201ENST00000610220 349 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC011890.2-201ENST00000613393 294 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AP001486.3-201ENST00000615334 372 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC011155.2-201ENST00000623202 216 ntBASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SMIM28A0A1B0GU29 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SMIM28A0A1B0GU29 Z82209.1-201ENST00000422141 2135 ntBASIC2.09□□□□□ -2.08
SMIM28A0A1B0GU29 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SMIM28A0A1B0GU29 Y_RNA.159-201ENST00000363674 87 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-1083P-201ENST00000384022 107 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-550P-201ENST00000391057 101 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 DEFB108C-201ENST00000400154 252 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 USP9YP6-201ENST00000413550 854 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AL365338.1-201ENST00000422282 858 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MTCYBP5-201ENST00000423752 1135 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MTND2P22-201ENST00000444325 1033 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms