Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORA9-201ENST00000384215 133 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 SNORD73A-201ENST00000386062 65 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 EI24P2-201ENST00000397776 1076 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 MTND3P8-201ENST00000412909 339 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 MTND4LP11-201ENST00000422184 280 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 RPL23AP83-201ENST00000434984 473 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC004383.1-201ENST00000438135 289 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AL513043.1-201ENST00000439124 535 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC009296.1-201ENST00000443146 155 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC006539.3-201ENST00000454258 129 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 PMCHL2-203ENST00000457791 237 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 RN7SL807P-201ENST00000470923 297 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 SMURF2P1-201ENST00000514992 481 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC023043.2-201ENST00000589678 1026 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC012493.2-201ENST00000595083 291 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AC024581.2-201ENST00000619986 252 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 AL109809.4-201ENST00000603520 2185 ntBASIC3.72□□□□□ -1.81
COL4A3BPQ9Y5P4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
COL4A3BPQ9Y5P4 AC138915.1-201ENST00000565427 1685 ntBASIC3.71□□□□□ -1.81
COL4A3BPQ9Y5P4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC010329.5-201ENST00000623497 2174 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU1-75P-201ENST00000347264 129 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 SNORD56.1-201ENST00000362913 68 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 Y_RNA.212-201ENST00000364177 102 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 U3.19-201ENST00000390893 196 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 RN7SKP32-201ENST00000410167 303 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 RNA5SP390-201ENST00000410191 113 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 RPL7P37-201ENST00000425095 738 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 SNAP23P1-201ENST00000433229 246 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU6-329P-201ENST00000459618 107 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC096745.1-201ENST00000509945 370 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 SNORA70.24-201ENST00000517233 118 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC005476.1-201ENST00000554427 397 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC005668.1-201ENST00000571142 476 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 BNIP3P16-201ENST00000589779 534 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 ELOCP5-201ENST00000604924 333 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 AL138726.1-201ENST00000614873 333 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL4A3BPQ9Y5P4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU6-845P-201ENST00000362578 103 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU6-562P-201ENST00000362731 107 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 SNORA68.1-201ENST00000364537 132 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU6-336P-201ENST00000364891 107 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR491-201ENST00000384877 84 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AL139396.1-201ENST00000421137 167 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 RNA5SP112-201ENST00000515937 99 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 SNORA31.23-201ENST00000517219 133 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 CKS1BP7-201ENST00000522230 235 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC104576.1-201ENST00000524225 88 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AL121579.1-201ENST00000555129 305 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC105137.2-201ENST00000569073 466 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR4742-201ENST00000581069 85 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR3672-201ENST00000584290 82 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR4765-201ENST00000585007 77 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 RPS15AP11-201ENST00000594193 385 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AL121917.1-203ENST00000605534 577 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR7112-201ENST00000616126 65 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC022306.2-201ENST00000617563 647 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR3651-201ENST00000630427 90 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 MIR7515-201ENST00000637837 67 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL4A3BPQ9Y5P4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 RNU6-428P-201ENST00000362942 107 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 Y_RNA.135-201ENST00000363439 95 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 SNORA72.1-201ENST00000363485 129 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 RPS29P13-201ENST00000402041 169 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 AC138623.1-201ENST00000418060 216 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 SAR1AP4-201ENST00000429225 591 ntBASIC3.69□□□□□ -1.82
COL4A3BPQ9Y5P4 AL645568.3-201ENST00000433683 316 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms