Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MAPK10-372ENST00000641954 3413 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.44-201ENST00000362676 108 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 MIR548H3-201ENST00000408771 118 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RNU6-130P-201ENST00000411112 103 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.793-201ENST00000411222 111 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AL451074.5-201ENST00000415894 435 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC004552.1-201ENST00000419089 348 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RPL23AP74-201ENST00000437246 471 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RPS29P31-201ENST00000446147 164 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AL353691.1-201ENST00000451332 387 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RPS26P3-201ENST00000470205 348 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC084357.1-201ENST00000473404 255 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC090543.2-201ENST00000483963 348 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC004057.1-201ENST00000485827 348 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AC008885.1-201ENST00000514930 301 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 SNORA25.14-201ENST00000516481 132 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 RNA5SP503-201ENST00000517047 117 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AP001485.1-201ENST00000604799 199 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 AL596245.1-201ENST00000618994 362 ntBASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.5□□□□□ -2.01
NOTCH3Q9UM47 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.84-201ENST00000363011 104 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 SNORD115-7-201ENST00000365306 82 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RNA5SP235-201ENST00000365411 114 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 SNORA70B-201ENST00000384210 135 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RNU6-393P-201ENST00000384475 107 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 SNORD70.1-201ENST00000391007 85 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 MRPL35P1-201ENST00000404272 572 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RAC1P7-201ENST00000445367 377 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 AC087385.1-201ENST00000475062 312 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 AC132942.1-201ENST00000486753 483 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RNU6-323P-201ENST00000521915 107 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 CBX3P8-201ENST00000532412 525 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 MIR4435-1-201ENST00000582552 80 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 VN1R91P-201ENST00000594377 169 ntBASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NOTCH3Q9UM47 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.83-201ENST00000363005 113 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNA5SP322-201ENST00000363617 119 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 SNORD50.2-201ENST00000365465 70 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNU6-1127P-201ENST00000384580 107 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AL023807.1-201ENST00000407932 359 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AL135938.1-201ENST00000443141 297 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC008264.1-201ENST00000447612 367 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC005297.2-201ENST00000450430 606 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RN7SL432P-201ENST00000484057 298 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AP001086.1-201ENST00000494882 321 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC005798.1-201ENST00000513715 387 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 SCARNA24.2-201ENST00000516968 130 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNU6-685P-201ENST00000517088 95 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 ATP5F1P5-201ENST00000526403 760 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AL670379.4-201ENST00000605279 254 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AL359547.2-201ENST00000615810 418 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC000123.2-201ENST00000623124 461 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC091925.2-201ENST00000625059 256 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AL136360.1-201ENST00000503377 1900 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 AC000123.3-201ENST00000624029 4975 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNU1-70P-201ENST00000362618 164 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNU6-1059P-201ENST00000363752 98 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.200-201ENST00000364018 102 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNU6-280P-201ENST00000364145 104 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 RNU4-50P-201ENST00000364361 141 ntBASIC2.48□□□□□ -2.01
NOTCH3Q9UM47 Y_RNA.380-201ENST00000365663 111 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms