Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AL359821.1-201ENST00000605519 182 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AP000240.1-201ENST00000609910 452 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AC092106.3-201ENST00000611308 722 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 FRG1KP-201ENST00000623592 341 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 AL078595.3-201ENST00000623815 1166 ntBASIC2.08□□□□□ -2.08
CTNNA3Q9UI47 ZNF876P-202ENST00000398732 1485 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 Y_RNA.46-201ENST00000362695 102 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 RNU6-511P-201ENST00000363496 107 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 RNU6-288P-201ENST00000363690 104 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 Y_RNA.796-201ENST00000364268 102 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 Y_RNA.799-201ENST00000364992 102 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 SNORA25.9-201ENST00000365087 128 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 RAC1P6-201ENST00000423911 575 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL591704.1-201ENST00000432574 275 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 NEFMP1-201ENST00000443423 1006 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 RNU6-953P-201ENST00000459154 107 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 MTND2P14-201ENST00000482139 351 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AC091965.2-201ENST00000512324 613 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 RNU6-572P-201ENST00000516724 80 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AP005639.2-201ENST00000527592 928 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AC024614.2-201ENST00000577584 372 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 BNIP3P40-201ENST00000596017 556 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL670379.10-201ENST00000604330 253 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL670379.9-201ENST00000605428 253 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 RNU6-91P-201ENST00000607774 107 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL365204.3-201ENST00000612448 685 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CTNNA3Q9UI47 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 SNORD48-201ENST00000364953 64 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 Y_RNA.355-201ENST00000365462 98 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 Z98749.2-208ENST00000381646 500 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 RNU6-701P-201ENST00000384059 107 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 SNORD115.1-201ENST00000391109 76 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 RPL22P18-201ENST00000417197 377 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 NDUFA5P4-201ENST00000436704 385 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 TAF9P1-201ENST00000445421 515 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 TAF9P2-201ENST00000454958 515 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 RNU6-678P-201ENST00000516832 109 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 RNU6-250P-201ENST00000516958 103 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AC084851.1-201ENST00000529105 249 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AC002400.1-201ENST00000569310 726 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AL670379.2-201ENST00000604983 252 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AL670379.4-201ENST00000605279 254 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 AL136370.1-201ENST00000608166 691 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 MIR8070-201ENST00000616510 88 ntBASIC2.06□□□□□ -2.08
CTNNA3Q9UI47 Y_RNA.18-201ENST00000362461 102 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 RNU6-960P-201ENST00000364056 120 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AC119751.3-201ENST00000399720 670 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AL591034.2-201ENST00000402839 359 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AC244636.1-201ENST00000421152 228 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 MTND1P20-201ENST00000430341 950 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AC003071.1-201ENST00000451219 789 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 KATNBL1P6-201ENST00000453433 915 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 HSPE1P23-201ENST00000509838 286 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AL354943.1-201ENST00000572103 781 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AC104581.2-201ENST00000572227 430 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AC107952.2-201ENST00000606048 486 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AC096772.1-201ENST00000609146 564 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 AL031667.3-201ENST00000620124 655 ntBASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
CTNNA3Q9UI47 RNU6-1200P-201ENST00000384162 107 ntBASIC2.04□□□□□ -2.08
CTNNA3Q9UI47 MIR518E-201ENST00000385252 88 ntBASIC2.04□□□□□ -2.08
CTNNA3Q9UI47 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.04□□□□□ -2.08
CTNNA3Q9UI47 ELOCP17-201ENST00000414751 326 ntBASIC2.04□□□□□ -2.08
CTNNA3Q9UI47 AP1B1P2-201ENST00000416196 106 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms