Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC002400.1-201ENST00000569310 726 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 BNIP3P9-201ENST00000603714 553 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC097468.3-201ENST00000607956 456 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 FARSBP1-201ENST00000435808 1778 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC092125.1-201ENST00000562568 1995 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 Y_RNA.99-201ENST00000363138 105 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 RNU5B-4P-201ENST00000363508 111 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 RNU2-41P-201ENST00000410991 178 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 RPS3AP22-201ENST00000488297 769 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 RPL39P36-201ENST00000490784 156 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 RNU6-965P-201ENST00000516721 96 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AP006587.4-201ENST00000526053 529 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 MIR4293-201ENST00000584305 78 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 VN1R83P-201ENST00000595685 445 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AP001981.2-201ENST00000603241 418 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 RPL21P136-201ENST00000605378 396 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AC006927.2-201ENST00000639256 389 ntBASIC1.09□□□□□ -2.23
VPS29Q9UBQ0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.09□□□□□ -2.24
VPS29Q9UBQ0 RNU6-655P-201ENST00000362858 107 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 RNU6-23P-201ENST00000363283 107 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 RNU6-944P-201ENST00000364023 107 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 RNU4-51P-201ENST00000364206 140 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 snoZ40.1-201ENST00000364540 72 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 SNORA40C-201ENST00000391285 128 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AL953862.1-201ENST00000423016 168 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 RAC1P6-201ENST00000423911 575 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 RPS6P15-201ENST00000431996 751 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 MTCO1P44-201ENST00000441935 243 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 PAXBP1P1-201ENST00000449315 447 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AL132657.2-201ENST00000564417 358 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 BNIP3P30-201ENST00000601184 574 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AC093648.1-201ENST00000623546 606 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AL512643.1-201ENST00000635735 524 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 MIR3529-201ENST00000637713 78 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 AL163152.1-201ENST00000642001 374 ntBASIC1.08□□□□□ -2.24
VPS29Q9UBQ0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 MIR378A-201ENST00000362177 66 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RNU6-529P-201ENST00000363383 104 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RNU6-1284P-201ENST00000363701 100 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RNU6-271P-201ENST00000363858 105 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RNU6-743P-201ENST00000364151 106 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RNU6-482P-201ENST00000391068 107 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RNU6-817P-201ENST00000391083 104 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 OR6C66P-201ENST00000414917 930 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 MTND4P25-201ENST00000441039 533 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AL035666.1-201ENST00000446195 348 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC012308.1-201ENST00000451232 178 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 DUXAP8-207ENST00000456786 622 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC093852.1-201ENST00000503587 266 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RN7SKP256-201ENST00000517201 314 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC018630.3-201ENST00000542637 96 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 RPL21P5-201ENST00000554662 472 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 MIR4524B-201ENST00000581569 115 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 VN1R80P-201ENST00000597126 338 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 AC092656.1-203ENST00000624134 423 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 DDX43P2-201ENST00000604753 1354 ntBASIC1.07□□□□□ -2.24
VPS29Q9UBQ0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 RNU6-14P-201ENST00000384630 106 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 USP9YP18-201ENST00000425912 695 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 MTND4P15-201ENST00000437913 1033 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 NEFMP1-201ENST00000443423 1006 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC079448.1-201ENST00000449377 373 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 RPS26P55-201ENST00000471178 356 ntBASIC1.06□□□□□ -2.24
VPS29Q9UBQ0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms