Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.86□□□□□ -1.95
BLOC1S4Q9NUP1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 SNORD62.1-201ENST00000362541 86 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 Y_RNA.159-201ENST00000363674 87 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-7-201ENST00000364784 107 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-8-201ENST00000365467 107 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RPS4XP8-201ENST00000402039 771 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RNA5SP390-201ENST00000410191 113 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 SUMO1P4-201ENST00000429430 302 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 HMGB1P31-201ENST00000437242 427 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 CKS1BP2-201ENST00000497342 240 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC093534.1-201ENST00000504977 132 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 RNU6-405P-201ENST00000516637 110 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AP003034.1-201ENST00000534621 422 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC087683.1-201ENST00000591187 441 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AP001596.2-201ENST00000608410 312 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC009090.3-201ENST00000616553 565 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC048344.4-201ENST00000619744 527 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 AC022418.1-201ENST00000624118 445 ntBASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
BLOC1S4Q9NUP1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AL133475.1-201ENST00000404414 305 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 RNU2-3P-201ENST00000410144 191 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 HMGN2P35-201ENST00000412164 270 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 CYCSP48-201ENST00000417124 323 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AL669831.1-202ENST00000428504 417 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 GTF2IP13-201ENST00000438487 386 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AL049873.1-201ENST00000480540 376 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC092436.1-201ENST00000506450 503 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC008526.1-201ENST00000509149 338 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC135279.1-201ENST00000543493 504 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC024909.2-201ENST00000553035 286 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 MTCO3P13-201ENST00000577757 781 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC073410.2-201ENST00000603240 332 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 NDUFA8P1-201ENST00000605525 367 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 AC093788.1-201ENST00000609356 927 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 U4atac.1-201ENST00000618345 95 ntBASIC2.84□□□□□ -1.95
BLOC1S4Q9NUP1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.96
BLOC1S4Q9NUP1 RNU1-57P-201ENST00000384491 166 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 RNA5SP184-201ENST00000411071 108 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 EIF4EP4-201ENST00000424916 578 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AL118520.1-201ENST00000450770 291 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 RPS3P1-201ENST00000456781 192 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC105313.1-201ENST00000509121 353 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 RNA5SP320-201ENST00000516263 124 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 RN7SKP219-201ENST00000516825 296 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AP003392.2-201ENST00000527269 208 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AP005136.1-201ENST00000579765 429 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC004223.2-201ENST00000590309 544 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC012507.3-201ENST00000603556 477 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC091805.2-201ENST00000603848 235 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AL160281.1-201ENST00000605307 311 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AL121917.1-203ENST00000605534 577 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 Z82243.1-201ENST00000609432 473 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 RMST_7.1-201ENST00000621935 268 ntBASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
BLOC1S4Q9NUP1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 RNU4-55P-201ENST00000410731 137 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 AC074117.2-201ENST00000417130 397 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms