Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TLR9Q9NR96 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TLR9Q9NR96 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TLR9Q9NR96 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.83□□□□□ -1.8
TLR9Q9NR96 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.83□□□□□ -1.8
TLR9Q9NR96 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TLR9Q9NR96 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TLR9Q9NR96 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TLR9Q9NR96 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TLR9Q9NR96 Y_RNA.39-201ENST00000362620 98 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU6-395P-201ENST00000365662 106 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 Y_RNA.380-201ENST00000365663 111 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU6-472P-201ENST00000384299 107 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TLR9Q9NR96 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 CHEK2P4-201ENST00000450340 246 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 FABP5P15-201ENST00000453566 214 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RPS23P3-201ENST00000470993 430 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 AC022493.1-201ENST00000492984 337 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU6-408P-201ENST00000515910 100 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 SNORA70.16-201ENST00000516390 95 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU6-1073P-201ENST00000517182 106 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TLR9Q9NR96 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 RMST_4.1-201ENST00000616886 107 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.82□□□□□ -1.8
TLR9Q9NR96 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TLR9Q9NR96 SRP72P2-201ENST00000344851 1979 ntBASIC3.82□□□□□ -1.8
TLR9Q9NR96 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TLR9Q9NR96 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TLR9Q9NR96 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TLR9Q9NR96 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TLR9Q9NR96 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 RNU6-874P-201ENST00000362390 105 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 Y_RNA.210-201ENST00000364161 110 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 RNA5SP167-201ENST00000365461 116 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 RNU2-33P-201ENST00000410344 192 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 DBIP2-201ENST00000419076 262 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 AL133396.1-201ENST00000432048 687 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 AL160314.1-201ENST00000490836 438 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 AC105758.1-201ENST00000506038 399 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 AC104576.1-201ENST00000524225 88 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 MIR8062-201ENST00000621515 85 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TLR9Q9NR96 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
TLR9Q9NR96 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.81□□□□□ -1.8
TLR9Q9NR96 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TLR9Q9NR96 NCAPGP1-201ENST00000505112 1814 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 Y_RNA.33-201ENST00000362591 102 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TLR9Q9NR96 Y_RNA.424-201ENST00000384063 103 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 Y_RNA.447-201ENST00000384184 113 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 Y_RNA.489-201ENST00000384410 101 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 RNU6-1179P-201ENST00000384667 107 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 SNORD73A-201ENST00000386062 65 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 RPL21P1-201ENST00000399532 476 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 AL031121.1-201ENST00000406553 254 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 BX276092.3-201ENST00000424182 230 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 UBE2D3P2-201ENST00000424409 445 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 HMGB1P9-201ENST00000429856 646 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 ARL5AP4-201ENST00000430731 512 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 RPS15AP10-201ENST00000432472 382 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.8□□□□□ -1.8
TLR9Q9NR96 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.8□□□□□ -1.8
TLR9Q9NR96 AP000873.1-201ENST00000463987 400 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 AC114801.2-201ENST00000503825 781 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.8□□□□□ -1.8
TLR9Q9NR96 RNU1-86P-201ENST00000516108 154 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 RNU1-107P-201ENST00000516617 154 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 HSBP1P1-201ENST00000555205 166 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 MIR4325-201ENST00000583049 90 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.8□□□□□ -1.8
TLR9Q9NR96 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.8□□□□□ -1.8
TLR9Q9NR96 Z98751.3-201ENST00000604447 521 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 RNU6-85P-201ENST00000605989 107 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 AC078938.1-201ENST00000620993 318 ntBASIC3.8□□□□□ -1.8
TLR9Q9NR96 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms