Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL157786.1-207ENST00000627771 695 ntBASIC2.37□□□□□ -2.03
HPS4Q9NQG7 AC090582.1-201ENST00000636321 199 ntBASIC2.37□□□□□ -2.03
HPS4Q9NQG7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.37□□□□□ -2.03
HPS4Q9NQG7 CKAP2P1-201ENST00000555477 2049 ntBASIC2.37□□□□□ -2.03
HPS4Q9NQG7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HPS4Q9NQG7 MTND5P30-201ENST00000452896 1731 ntBASIC2.37□□□□□ -2.03
HPS4Q9NQG7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AL109809.4-201ENST00000603520 2185 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 RNU6-748P-201ENST00000384648 107 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 MIR764-201ENST00000390811 85 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 BTF3L4P1-201ENST00000413813 468 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 HMGN2P3-201ENST00000433603 273 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 MTATP6P16-201ENST00000434543 526 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 RPS15AP28-201ENST00000435088 386 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 HMGN2P5-201ENST00000436882 273 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AC016691.1-201ENST00000441321 413 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AL583843.1-201ENST00000456070 346 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 RNU6-956P-201ENST00000458868 103 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 MTND4P2-201ENST00000507767 1203 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 RBBP4P6-201ENST00000508098 202 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HPS4Q9NQG7 MTCYBP20-201ENST00000524239 1129 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AC008521.1-201ENST00000587471 187 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 DEFB131E-202ENST00000602581 683 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 SEPT7P9-203ENST00000604116 343 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AL021997.1-201ENST00000605757 193 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 MIR6873-201ENST00000622788 63 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 AL359854.1-201ENST00000614203 1594 ntBASIC2.36□□□□□ -2.03
HPS4Q9NQG7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 SNORA75-201ENST00000384158 137 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 RNU6-248P-201ENST00000410720 107 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AL031779.1-201ENST00000415663 330 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 MTND3P17-201ENST00000416968 344 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 MTCO2P34-201ENST00000421994 607 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AL353706.1-201ENST00000436728 494 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 MTND1P29-201ENST00000448112 647 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 MTCYBP1-201ENST00000454315 1119 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AL441985.1-201ENST00000457727 251 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC116562.3-201ENST00000506136 177 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 SNORA18.6-201ENST00000516792 115 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC068587.5-201ENST00000528506 175 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AP002453.2-201ENST00000533503 320 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 CYCSP26-201ENST00000534107 320 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC010186.2-204ENST00000537668 439 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 BNIP3P10-201ENST00000605360 577 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC098614.4-201ENST00000607601 462 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC010678.1-201ENST00000614118 713 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 AC241585.2-209ENST00000638217 143 ntBASIC2.35□□□□□ -2.03
HPS4Q9NQG7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HPS4Q9NQG7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 MIR412-201ENST00000362142 91 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 SNORD3E-201ENST00000362899 217 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RNU6-179P-201ENST00000363350 107 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 Y_RNA.359-201ENST00000365498 102 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RNU6-348P-201ENST00000384386 107 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AL591416.1-201ENST00000404015 867 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 U3.37-201ENST00000408528 213 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 Y_RNA.623-201ENST00000411128 95 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC016831.2-201ENST00000417179 352 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RPL30P4-201ENST00000429309 333 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RPL31P35-201ENST00000431058 377 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 VN1R108P-201ENST00000431580 830 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 RPS15AP9-201ENST00000439856 381 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HPS4Q9NQG7 snoU13.23-201ENST00000458863 104 ntBASIC2.34□□□□□ -2.03
HPS4Q9NQG7 AC080013.2-201ENST00000460866 323 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms