Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC103988.1-201ENST00000566382 2177 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 RNU6-942P-201ENST00000363002 107 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 MIR767-201ENST00000390228 109 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 RNU6-750P-201ENST00000390946 107 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 RNA5SP354-201ENST00000391247 136 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AL357075.1-201ENST00000404107 726 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 RNU4-47P-201ENST00000410876 114 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 MTND3P8-201ENST00000412909 339 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 SNORD56-201ENST00000413522 71 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 VN1R36P-201ENST00000414936 291 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC009414.1-201ENST00000427200 443 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 RPL23AP45-201ENST00000476406 468 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 RNU6-256P-201ENST00000516747 97 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC025423.5-201ENST00000550230 219 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 MIR3942-201ENST00000585264 109 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 AL353743.1-202ENST00000431724 1695 ntBASIC2.78□□□□□ -1.96
HINT3Q9NQE9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HINT3Q9NQE9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.78□□□□□ -1.97
HINT3Q9NQE9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
HINT3Q9NQE9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC010889.1-201ENST00000566193 2666 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 RNA5SP139-201ENST00000364340 117 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 RNU5E-7P-201ENST00000365290 117 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 RNU6-1027P-201ENST00000383998 107 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 FTH1P15-201ENST00000406984 280 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC096649.2-201ENST00000416186 393 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AL353678.1-201ENST00000422735 741 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC093151.1-201ENST00000427711 313 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AL359672.1-201ENST00000442302 409 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 MTCO2P3-201ENST00000442543 421 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 MTND5P20-201ENST00000448677 143 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AP004217.1-201ENST00000480579 346 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC008628.2-201ENST00000502605 298 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 MTND4LP22-201ENST00000508209 276 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 RAC1P5-201ENST00000512182 576 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 RNU6-1332P-201ENST00000516666 104 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 SNORD19.2-201ENST00000516978 73 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AP005597.4-201ENST00000526762 229 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AP000889.2-201ENST00000532684 490 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 SCOCP1-201ENST00000554676 349 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 MIR3672-201ENST00000584290 82 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 UBE2V2P2-201ENST00000587677 504 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AL355073.2-201ENST00000612106 557 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AL442067.2-201ENST00000614033 363 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AC005858.4-201ENST00000623191 700 ntBASIC2.77□□□□□ -1.97
HINT3Q9NQE9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
HINT3Q9NQE9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 RNU6-78P-201ENST00000362897 107 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 RNU6-1013P-201ENST00000384180 107 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 SNORD73A-201ENST00000386062 65 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 RN7SKP32-201ENST00000410167 303 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 PDCL2P1-201ENST00000419302 352 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 MTND4LP16-201ENST00000440828 295 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 Z75741.1-201ENST00000446793 314 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.76□□□□□ -1.97
HINT3Q9NQE9 AC109925.1-201ENST00000478069 331 ntBASIC2.76□□□□□ -1.97
HINT3Q9NQE9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms