Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 MIR4299-201ENST00000577899 72 ntBASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 AC005771.1-201ENST00000585581 349 ntBASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 AL355297.2-201ENST00000604792 129 ntBASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 AC122133.1-201ENST00000613964 233 ntBASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.65□□□□□ -2.15
EXOSC4Q9NPD3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 U3.13-201ENST00000364804 214 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 RNU6-641P-201ENST00000384006 107 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 RPL17P50-201ENST00000396131 546 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL512604.1-201ENST00000404812 257 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 RN7SKP192-201ENST00000411291 327 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC009518.2-201ENST00000418056 731 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AIMP1P2-201ENST00000425294 312 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 CALM2P2-201ENST00000428512 440 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 MTND5P25-201ENST00000430499 799 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL445646.1-201ENST00000431784 216 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC009238.1-201ENST00000442165 424 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC009237.6-201ENST00000446969 424 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL441985.1-201ENST00000457727 251 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 RPL21P99-201ENST00000480369 423 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC018437.1-201ENST00000492214 406 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 ANXA2P1-201ENST00000505539 926 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 SNORA4.4-201ENST00000515921 135 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 ADI1P3-201ENST00000549509 470 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 MIR3915-201ENST00000578518 97 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL670379.10-201ENST00000604330 253 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL670379.9-201ENST00000605428 253 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC091304.9-201ENST00000612091 226 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC012409.4-201ENST00000612923 249 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC023510.2-201ENST00000622162 746 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC138627.2-201ENST00000624202 601 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 AL354685.2-201ENST00000448218 1447 ntBASIC1.64□□□□□ -2.15
EXOSC4Q9NPD3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 U8.3-201ENST00000363321 132 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 RNY4P34-201ENST00000364779 95 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 RNU6-395P-201ENST00000365662 106 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 MIR578-201ENST00000384828 96 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 MIR558-201ENST00000384920 94 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 MIR95-201ENST00000385072 81 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 RPL23AP32-201ENST00000395315 459 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 RPS3AP36-201ENST00000398190 775 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 RNU2-39P-201ENST00000410604 198 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 Y_RNA.623-201ENST00000411128 95 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC127391.1-201ENST00000411737 98 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL031779.1-201ENST00000415663 330 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL365338.1-201ENST00000422282 858 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL160275.3-201ENST00000423876 471 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 MTND4P20-201ENST00000424125 869 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC137499.1-201ENST00000427602 88 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC018868.1-201ENST00000491307 315 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 RPL22P13-201ENST00000493291 347 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC112206.3-201ENST00000514578 389 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 FABP5P5-201ENST00000515537 406 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC106038.2-201ENST00000520706 568 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 LRRC34P1-201ENST00000542742 915 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL031274.2-201ENST00000599419 203 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL713866.2-201ENST00000603579 219 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AC092354.1-201ENST00000606057 376 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL121992.2-201ENST00000606262 256 ntBASIC1.63□□□□□ -2.15
EXOSC4Q9NPD3 AL360219.1-201ENST00000610230 366 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms