Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SSU72Q9NP77 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 RNU6-778P-201ENST00000363269 103 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 Y_RNA.275-201ENST00000364726 110 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 Y_RNA.291-201ENST00000364886 113 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.11□□□□□ -1.75
SSU72Q9NP77 Y_RNA.569-201ENST00000384749 103 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 MIR153-2-201ENST00000385225 87 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 COX6B1P7-201ENST00000430845 235 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.11□□□□□ -1.75
SSU72Q9NP77 RPL23AP14-201ENST00000468281 468 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 AP004607.1-201ENST00000524456 203 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.11□□□□□ -1.75
SSU72Q9NP77 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.11□□□□□ -1.75
SSU72Q9NP77 AC025946.2-201ENST00000603398 234 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 FTX_3.1-201ENST00000610451 147 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 MIR6862-1-201ENST00000613016 70 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 MIR6862-2-201ENST00000614755 70 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 AC244205.2-202ENST00000635781 342 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.11□□□□□ -1.75
SSU72Q9NP77 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 AC135776.4-201ENST00000624300 1904 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSU72Q9NP77 RAD17P1-201ENST00000418130 2042 ntBASIC4.11□□□□□ -1.75
SSU72Q9NP77 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 RNU1-14P-201ENST00000362759 152 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 RNU6-961P-201ENST00000363893 105 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 RNA5SP240-201ENST00000365355 128 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 MIR329-1-201ENST00000385028 80 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 SNORA53-201ENST00000391141 249 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 WARS2P1-201ENST00000429678 537 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 AL500522.2-201ENST00000448562 343 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 RPL31P13-201ENST00000484151 370 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 AC093840.1-201ENST00000511599 336 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 RNU1-103P-201ENST00000516502 125 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 RN7SKP49-201ENST00000516675 260 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 RNU6-567P-201ENST00000516746 107 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 MIR3934-201ENST00000579806 107 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 MIR4646-201ENST00000580775 63 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 AC053481.4-201ENST00000583164 216 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 AC072026.1-201ENST00000605023 201 ntBASIC4.1□□□□□ -1.75
SSU72Q9NP77 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSU72Q9NP77 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSU72Q9NP77 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSU72Q9NP77 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.82-201ENST00000363000 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.92-201ENST00000363043 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU1-18P-201ENST00000363062 164 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU6-626P-201ENST00000363354 107 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.235-201ENST00000364412 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.306-201ENST00000365015 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.312-201ENST00000365089 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.322-201ENST00000365151 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.418-201ENST00000384029 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU6-1181P-201ENST00000384191 106 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU6-1145P-201ENST00000384246 107 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.570-201ENST00000384750 101 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU6-918P-201ENST00000391219 106 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 UBA52P6-201ENST00000399822 382 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RNU5A-5P-201ENST00000411054 116 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 EIF1AXP1-201ENST00000419267 435 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 AL356387.2-201ENST00000422272 243 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 AL590383.1-201ENST00000428602 75 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 AC068287.1-201ENST00000430283 295 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RPL23AP46-201ENST00000438548 490 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 NDUFB4P10-201ENST00000452541 359 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 Y_RNA.650-201ENST00000459002 102 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.09□□□□□ -1.75
SSU72Q9NP77 RPL21P104-201ENST00000464143 478 ntBASIC4.09□□□□□ -1.75
SSU72Q9NP77 RPL21P126-201ENST00000470049 478 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms