Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 CYCSP32-201ENST00000440548 321 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 SNORA31.1-201ENST00000515993 133 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 SNORA31.5-201ENST00000516190 133 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 SCARNA14-201ENST00000516903 136 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AC010653.1-201ENST00000571108 881 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AP001836.1-201ENST00000604675 523 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AC019159.1-201ENST00000605094 187 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 AC233263.6-201ENST00000631132 1963 ntBASIC3.78□□□□□ -1.8
TRIM39Q9HCM9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.80-201ENST00000362996 102 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 U3.6-201ENST00000363622 211 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.314-201ENST00000365114 102 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 MIR625-201ENST00000385047 85 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 FTH1P15-201ENST00000406984 280 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 SNORA57.3-201ENST00000411095 141 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 CYCSP19-201ENST00000411715 316 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC007098.1-201ENST00000420122 367 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AL591419.1-201ENST00000427423 339 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RPS15AP5-201ENST00000436276 388 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AL714022.1-201ENST00000439897 151 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 MED28P2-201ENST00000475771 317 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RNU6-120P-201ENST00000516077 103 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RNU6-581P-201ENST00000516214 105 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC022695.1-201ENST00000522089 237 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AP000889.1-201ENST00000530968 660 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC090877.1-201ENST00000561418 344 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC009163.5-201ENST00000575421 637 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC006130.2-201ENST00000586202 326 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC008737.2-201ENST00000599446 118 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC005014.2-201ENST00000607795 599 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC009318.2-201ENST00000610917 651 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC007485.1-201ENST00000616755 206 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC091925.1-201ENST00000623204 462 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC097372.5-201ENST00000623665 376 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 AC241585.2-209ENST00000638217 143 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 HAUS6P2-201ENST00000433254 2404 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.77□□□□□ -1.81
TRIM39Q9HCM9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC009541.1-201ENST00000438279 2662 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC066616.2-201ENST00000559334 1481 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 SNORD56.1-201ENST00000362913 68 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 Y_RNA.123-201ENST00000363338 102 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 RNU6-784P-201ENST00000384330 106 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 MIR134-201ENST00000385258 73 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC074117.2-201ENST00000417130 397 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 MTCYBP10-201ENST00000424905 650 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AL161651.1-201ENST00000440882 223 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 GSTA11P-201ENST00000452866 669 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AL441985.1-201ENST00000457727 251 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 RPS29P27-201ENST00000463711 170 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 HMGN1P10-201ENST00000474557 553 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 SNORD19.2-201ENST00000516978 73 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 MIR5696-201ENST00000578474 85 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC092447.9-201ENST00000603395 144 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AL356157.2-201ENST00000605122 111 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AL391261.4-201ENST00000616012 481 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 AC119674.1-207ENST00000641355 633 ntBASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM39Q9HCM9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms