Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNU6-336P-201ENST00000364891 107 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 Y_RNA.541-201ENST00000384640 113 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 MIR124-3-201ENST00000384866 87 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 SNORA40C-201ENST00000391285 128 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 MTCYBP2-201ENST00000407745 171 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 MIR1183-201ENST00000408856 89 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RHEBP3-201ENST00000411920 351 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 Z82188.1-201ENST00000436709 154 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AC013470.1-201ENST00000453438 462 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AC092798.1-201ENST00000458542 409 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RN7SL271P-201ENST00000487601 295 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 SNORA31.6-201ENST00000516241 130 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 Y_RNA.700-201ENST00000516806 100 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RNA5SP143-201ENST00000516936 115 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 CASP1P1-201ENST00000526345 212 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AP002770.2-201ENST00000543613 532 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 MIR3160-1-201ENST00000577972 85 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 MIR4644-201ENST00000579929 84 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 RPL23AP78-201ENST00000599928 470 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 AC005046.1-201ENST00000608515 625 ntBASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.57□□□□□ -1.84
SEC61A2Q9H9S3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 Z73965.1-201ENST00000623412 2297 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 LINC02555-201ENST00000563933 1951 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 Y_RNA.180-201ENST00000363867 113 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 RNA5SP283-201ENST00000365604 119 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-937P-201ENST00000384325 106 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AL079342.1-201ENST00000401460 267 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 MRPL35P1-201ENST00000404272 572 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 MIR1193-201ENST00000408109 78 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 RPL17P36-201ENST00000420302 549 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 RPL21P40-201ENST00000428586 483 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AL117339.2-201ENST00000430475 180 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 TBCAP1-201ENST00000436520 327 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 ANP32BP2-201ENST00000454525 545 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AC026402.1-201ENST00000513642 170 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 RNU4-71P-201ENST00000516258 113 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-789P-201ENST00000517105 102 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AC022868.1-201ENST00000517767 391 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AC104581.2-201ENST00000572227 430 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 SNRPGP15-201ENST00000600149 222 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 BRDTP1-201ENST00000605735 677 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 Y_RNA.772-201ENST00000606692 102 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AC090132.2-201ENST00000615881 347 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 AC116096.1-201ENST00000566804 2314 ntBASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SEC61A2Q9H9S3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-222P-201ENST00000362438 107 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 RPS29P13-201ENST00000402041 169 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 Z98941.1-201ENST00000407764 100 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AL078601.1-201ENST00000444542 271 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AL162151.2-201ENST00000448875 158 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 NDUFS5P3-201ENST00000450668 321 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 ANXA2P1-201ENST00000505539 926 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC120057.2-201ENST00000571520 271 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 MIR3921-201ENST00000577308 85 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 MIR4643-201ENST00000577473 78 ntBASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.55□□□□□ -1.84
SEC61A2Q9H9S3 AC060766.3-201ENST00000591442 263 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms