Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RNU6-946P-201ENST00000383878 107 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 MIR583-201ENST00000384846 75 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RNU2-49P-201ENST00000410666 184 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 PIGFP2-201ENST00000421400 651 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC093106.2-201ENST00000428212 385 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 MTCO3P5-201ENST00000433620 714 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AL031659.1-201ENST00000447075 539 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RNU6-953P-201ENST00000459154 107 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RPL39P36-201ENST00000490784 156 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RPS27AP10-201ENST00000496103 208 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 MTCO3P28-201ENST00000513351 515 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RNA5SP182-201ENST00000516064 82 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 RNU6-1220P-201ENST00000517126 108 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 MIR3913-1-201ENST00000577744 102 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.11□□□□□ -2.07
NXF3Q9H4D5 SNORD14A-201ENST00000606526 91 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 AC006566.1-201ENST00000608943 513 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 MIR3199-2-201ENST00000636243 86 ntBASIC2.11□□□□□ -2.07
NXF3Q9H4D5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC010889.1-201ENST00000566193 2666 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 Y_RNA.22-201ENST00000362492 102 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 RNU6-512P-201ENST00000364438 103 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 DEFB108C-201ENST00000400154 252 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 RNU2-20P-201ENST00000410425 191 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 RPS12P24-201ENST00000412619 387 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 BTF3L4P1-201ENST00000413813 468 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 WARS2P1-201ENST00000429678 537 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC007677.1-201ENST00000445757 515 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 HMGN2P23-201ENST00000456759 269 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 KLF3P2-201ENST00000465138 268 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 SCARNA24.1-201ENST00000516465 137 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 MTCO2P4-201ENST00000517968 247 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC012213.3-201ENST00000577199 777 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC011494.1-201ENST00000596454 237 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AL391813.1-201ENST00000603098 260 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC004805.2-201ENST00000605382 482 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC099842.1-201ENST00000619919 596 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 U2.21-201ENST00000637295 81 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NXF3Q9H4D5 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
NXF3Q9H4D5 AC004520.1-201ENST00000608362 1413 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 MTND5P30-201ENST00000452896 1731 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNA5SP99-201ENST00000364020 114 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNU6-108P-201ENST00000365558 107 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNU6-1119P-201ENST00000384349 108 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNU2-39P-201ENST00000410604 198 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNU2-68P-201ENST00000410878 191 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 BX295541.1-201ENST00000417774 250 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 CYCSP49-201ENST00000420810 319 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AL445685.2-201ENST00000422551 342 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RPL31P35-201ENST00000431058 377 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 GPM6BP2-201ENST00000432046 144 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 GPM6BP1-201ENST00000446387 144 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC079448.1-201ENST00000449377 373 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 CECR9-201ENST00000453421 199 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 FAM92A1P2-202ENST00000504766 877 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNU6-677P-201ENST00000516914 101 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 RNU6-430P-201ENST00000517078 107 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.09□□□□□ -2.07
NXF3Q9H4D5 OR5B19P-201ENST00000531766 928 ntBASIC2.09□□□□□ -2.07
NXF3Q9H4D5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms