Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MTCO1P44-201ENST00000441935 243 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AL358794.1-201ENST00000445689 381 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 RPS26P55-201ENST00000471178 356 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 MTCYBP43-201ENST00000513621 740 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 RNU6-143P-201ENST00000516942 93 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC087276.1-201ENST00000529659 480 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 RPL30P11-203ENST00000598995 310 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC073410.2-201ENST00000603240 332 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 BCRP9-201ENST00000605312 388 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AC112220.3-201ENST00000605502 502 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 AL355472.4-201ENST00000610233 626 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.12□□□□□ -2.23
VCX3BQ9H321 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.12□□□□□ -2.23
VCX3BQ9H321 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
VCX3BQ9H321 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VCX3BQ9H321 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
VCX3BQ9H321 RNU6-166P-201ENST00000384371 107 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 RNU6-769P-201ENST00000384407 104 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 RNU6-278P-201ENST00000390945 109 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 MIR1262-201ENST00000408276 93 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 RN7SKP284-201ENST00000411002 343 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 VPS26BP1-201ENST00000417155 755 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 EEF1A1P39-201ENST00000440791 250 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 RPL39P29-201ENST00000447779 157 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 RNU6-953P-201ENST00000459154 107 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 MTND1P3-201ENST00000484956 952 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC109927.2-201ENST00000506416 303 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 RNU6-1315P-201ENST00000517187 99 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 RNU6-586P-201ENST00000517265 104 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 AC096772.1-201ENST00000609146 564 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 AL590808.1-201ENST00000618696 141 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 IGHVIII-44-202ENST00000636235 289 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 MTND5P42-201ENST00000637720 498 ntBASIC1.11□□□□□ -2.23
VCX3BQ9H321 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
VCX3BQ9H321 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VCX3BQ9H321 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 MIR301A-201ENST00000385261 86 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 SNORA48.1-201ENST00000390879 135 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 RNU2-48P-201ENST00000410694 191 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 MTATP6P20-201ENST00000414147 562 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 RPS3AP37-201ENST00000419176 745 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 RAC1P6-201ENST00000423911 575 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 CST2P1-201ENST00000425770 87 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 USP9YP18-201ENST00000425912 695 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 AL591704.1-201ENST00000432574 275 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 TIMM9P1-201ENST00000436122 256 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 USP9YP17-201ENST00000444617 696 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 MED28P2-201ENST00000475771 317 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AC068587.2-201ENST00000478386 781 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VCX3BQ9H321 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.1□□□□□ -2.23
VCX3BQ9H321 AP000763.2-201ENST00000540641 163 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AC090115.3-201ENST00000553218 849 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 MIR3683-201ENST00000580847 82 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 CLIC4P2-201ENST00000601934 717 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 RNU6-88P-201ENST00000606801 100 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AC098614.4-201ENST00000607601 462 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AC093788.1-201ENST00000609356 927 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 AC106858.1-201ENST00000637497 429 ntBASIC1.1□□□□□ -2.23
VCX3BQ9H321 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
VCX3BQ9H321 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
VCX3BQ9H321 SNORD114-19-201ENST00000363072 75 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 RNU5E-10P-201ENST00000363506 118 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 SNORA4.1-201ENST00000364263 144 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 SMIM11P1-201ENST00000369586 178 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 SNORA75B-201ENST00000384053 137 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 RNU6-1222P-201ENST00000384615 107 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VCX3BQ9H321 SNORA11.1-201ENST00000408133 129 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 RNU6-1025P-201ENST00000410629 104 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 RNA5SP508-201ENST00000411327 119 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 TOMM20P4-201ENST00000427861 435 ntBASIC1.09□□□□□ -2.23
VCX3BQ9H321 AL591212.2-201ENST00000433923 257 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms