Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC091152.2-201ENST00000591628 2569 ntBASIC3.83□□□□□ -1.8
VPS11Q9H270 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS11Q9H270 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VPS11Q9H270 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS11Q9H270 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS11Q9H270 Y_RNA.84-201ENST00000363011 104 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 Y_RNA.237-201ENST00000364439 102 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RNU6-190P-201ENST00000384154 102 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 MIR199A2-201ENST00000385289 110 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RNU6-174P-201ENST00000410406 106 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RNU6-1140P-201ENST00000410517 106 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RNU2-25P-201ENST00000411041 191 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RPL18P10-201ENST00000425606 538 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 C4BPAP2-201ENST00000428434 478 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AC007919.1-201ENST00000429380 217 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AL645568.3-201ENST00000433683 316 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RNU7-169P-201ENST00000459456 61 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RPL37P6-201ENST00000460682 294 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RN7SL330P-201ENST00000469709 307 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS11Q9H270 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS11Q9H270 SNORA31.9-201ENST00000516429 84 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 CYCSP27-201ENST00000527643 293 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 CBX3P8-201ENST00000532412 525 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 YPEL5P3-201ENST00000547227 352 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS11Q9H270 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS11Q9H270 MIR4738-201ENST00000579134 87 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS11Q9H270 AC008962.1-201ENST00000605729 304 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 RNVU1-4-201ENST00000612985 164 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 MIR8058-201ENST00000615737 89 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AC068831.7-201ENST00000616954 363 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 AL731566.2-201ENST00000618971 317 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VPS11Q9H270 FAM35BP-202ENST00000497389 3337 ntBASIC3.82□□□□□ -1.8
VPS11Q9H270 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS11Q9H270 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS11Q9H270 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS11Q9H270 RNU6-1303P-201ENST00000364841 107 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 MIR215-201ENST00000384858 110 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AL139039.1-201ENST00000401900 692 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AL603910.2-201ENST00000407268 136 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS11Q9H270 MTCO3P29-201ENST00000432119 779 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AL512844.2-201ENST00000433990 593 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS11Q9H270 SETP5-201ENST00000437270 562 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS11Q9H270 PIGFP3-201ENST00000441918 722 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 PRDX3P3-201ENST00000447765 522 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 RPS3AP46-201ENST00000448352 682 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 RPL32P34-201ENST00000486380 400 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS11Q9H270 RNA5SP208-201ENST00000516156 78 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 Y_RNA.683-201ENST00000516508 93 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS11Q9H270 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS11Q9H270 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS11Q9H270 HMGB1P14-201ENST00000557424 591 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AC023575.1-201ENST00000580510 358 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AC053481.4-201ENST00000583164 216 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 AC107294.1-201ENST00000609524 467 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 MIR6758-201ENST00000620653 63 ntBASIC3.81□□□□□ -1.8
VPS11Q9H270 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
VPS11Q9H270 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS11Q9H270 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
VPS11Q9H270 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS11Q9H270 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
VPS11Q9H270 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VPS11Q9H270 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS11Q9H270 AC022336.2-201ENST00000568966 2538 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 AC126755.2-208ENST00000327792 462 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 AC138969.1-213ENST00000331436 462 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 Y_RNA.65-201ENST00000362846 100 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6-1167P-201ENST00000363227 94 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 Y_RNA.269-201ENST00000364685 89 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6-283P-201ENST00000364788 107 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6-214P-201ENST00000384130 107 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 MIR325-201ENST00000385260 98 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6-293P-201ENST00000411259 106 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 AC092047.1-201ENST00000424997 240 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS11Q9H270 RPEP5-201ENST00000441137 268 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS11Q9H270 KC877373.1-201ENST00000479066 408 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6-677P-201ENST00000516914 101 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 RNU6-1231P-201ENST00000517185 103 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS11Q9H270 AC007991.1-201ENST00000522680 631 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS11Q9H270 VN1R91P-201ENST00000594377 169 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 267.1 ms