Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RPL23AP45-201ENST00000476406 468 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 RPS29P20-201ENST00000489592 171 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 AC112206.3-201ENST00000514578 389 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 RNU6-718P-201ENST00000516166 105 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 AP005435.4-201ENST00000529514 284 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 AL355877.2-201ENST00000603670 358 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 RMST_4.1-201ENST00000616886 107 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 AL354950.2-201ENST00000617939 290 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 AC004944.1-201ENST00000517807 3059 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.07□□□□□ -1.92
USP44Q9H0E7 AC016717.2-201ENST00000609089 5141 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.07□□□□□ -1.92
USP44Q9H0E7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP44Q9H0E7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 CIR1P3-201ENST00000405137 479 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 MTCYBP8-201ENST00000422855 651 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 TOMM20P4-201ENST00000427861 435 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 USP9YP28-201ENST00000435142 589 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 AL441985.1-201ENST00000457727 251 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 AC091885.1-201ENST00000506658 268 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 HSPA8P4-201ENST00000511877 1920 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 RAC1P5-201ENST00000512182 576 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 AC027807.1-201ENST00000559921 996 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
USP44Q9H0E7 AC010889.1-201ENST00000566193 2666 ntBASIC3.06□□□□□ -1.92
USP44Q9H0E7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.05□□□□□ -1.92
USP44Q9H0E7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP44Q9H0E7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP44Q9H0E7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 RNU6-552P-201ENST00000362869 119 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 Y_RNA.450-201ENST00000384198 113 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 RNU6-45P-201ENST00000384471 107 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 MIR578-201ENST00000384828 96 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 SNORD115-47-201ENST00000391226 86 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 RPL21P90-201ENST00000415692 466 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 WASF1P1-201ENST00000447560 1131 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 AC073415.1-201ENST00000449240 153 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.05□□□□□ -1.92
USP44Q9H0E7 MTAPP1-201ENST00000489154 819 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.05□□□□□ -1.92
USP44Q9H0E7 AC074344.1-201ENST00000512823 224 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 RNU6-835P-201ENST00000516974 104 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
USP44Q9H0E7 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 MTCO3P23-201ENST00000561363 289 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 BNIP3P30-201ENST00000601184 574 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.05□□□□□ -1.92
USP44Q9H0E7 AC046143.2-201ENST00000609789 160 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 UCA1.1-201ENST00000620952 75 ntBASIC3.05□□□□□ -1.92
USP44Q9H0E7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP44Q9H0E7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 RNY4P14-201ENST00000363656 96 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 SNORA69-201ENST00000383895 132 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 RNU6-393P-201ENST00000384475 107 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 ARL5AP1-201ENST00000418991 388 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL161651.1-201ENST00000440882 223 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL360271.2-201ENST00000447710 161 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 RPL31P41-201ENST00000477967 372 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 MIR892C-201ENST00000516410 77 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 HIF1AP1-201ENST00000553642 175 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL391813.1-201ENST00000603098 260 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL162413.1-201ENST00000603198 110 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 Z82243.1-201ENST00000609432 473 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 U6atac.1-201ENST00000616025 117 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AC090617.7-201ENST00000623952 126 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 AL160394.1-201ENST00000624765 724 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 SCARNA4-202ENST00000625402 129 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 MIR3688-2-201ENST00000636963 87 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 MIR1321-201ENST00000637766 79 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms