Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 RNU2-48P-201ENST00000410694 191 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 ELOCP4-201ENST00000420090 333 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AL356583.2-201ENST00000426536 280 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 EPS15P1-201ENST00000448836 336 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 RPL21P99-201ENST00000480369 423 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 HMGB1P35-201ENST00000503360 598 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC117522.1-201ENST00000509821 380 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC026464.5-201ENST00000562497 722 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC026271.5-201ENST00000577873 130 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 SNRPGP17-201ENST00000603780 214 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC004223.4-201ENST00000612426 332 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 AC025034.2-201ENST00000623264 286 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 ZNF702P-202ENST00000434269 1966 ntBASIC1.58□□□□□ -2.16
SLIRPQ9GZT3 OR4G2P-201ENST00000328113 903 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 RNA5SP289-201ENST00000362332 137 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 SNORA5B-201ENST00000363786 132 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 RNU6-371P-201ENST00000364283 108 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 RPL23AP32-201ENST00000395315 459 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 RNA5SP390-201ENST00000410191 113 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 RNU2-2P-201ENST00000410396 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL360271.2-201ENST00000447710 161 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 USP9YP12-201ENST00000450481 570 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL137159.1-201ENST00000452808 512 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 ZNF114P1-201ENST00000453500 292 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 snoU13.14-201ENST00000459372 104 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL121594.1-201ENST00000475906 575 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 SNORA3.4-201ENST00000515969 96 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AP001646.1-201ENST00000527936 915 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 EIF4BP1-201ENST00000554881 351 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 MIR4287-201ENST00000579398 78 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AC008521.1-201ENST00000587471 187 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AC234772.3-201ENST00000602277 528 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL353778.1-201ENST00000603149 408 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL627230.6-201ENST00000611129 280 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.15-201ENST00000611544 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.16-201ENST00000613119 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.12-201ENST00000613778 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.20-201ENST00000613956 192 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.9-201ENST00000615427 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.11-201ENST00000616345 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.2-201ENST00000616535 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.3-201ENST00000617785 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.19-201ENST00000618602 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 RNU2-1-201ENST00000618664 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.6-201ENST00000619225 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.5-201ENST00000619465 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 U2.10-201ENST00000620268 191 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 AL157786.1-207ENST00000627771 695 ntBASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SLIRPQ9GZT3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RNU6-61P-201ENST00000365528 109 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 SNORD116-20-201ENST00000384529 92 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RNU6-1179P-201ENST00000384667 107 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RPS3AP36-201ENST00000398190 775 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RNU2-23P-201ENST00000410545 195 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 SNORD56-201ENST00000413522 71 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC074117.2-201ENST00000417130 397 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AL139413.1-201ENST00000421309 217 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AL353689.1-201ENST00000438895 199 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC004924.1-201ENST00000480160 781 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RN7SKP265-201ENST00000516448 223 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 SNORA43.2-201ENST00000516652 128 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RNU6-667P-201ENST00000517186 102 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC022616.3-201ENST00000523940 148 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 CYCSP27-201ENST00000527643 293 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms