Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 MTND2P3-201ENST00000452458 470 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 TPRKBP1-201ENST00000456243 481 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 AC093809.1-201ENST00000509155 340 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 SNORA48.9-201ENST00000516419 162 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 SNRPGP1-201ENST00000553864 222 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 LINC00557-201ENST00000563184 1279 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM4Q9C037 AC099842.1-201ENST00000619919 596 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 U6.99-201ENST00000637524 83 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRIM4Q9C037 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM4Q9C037 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 SNORA18.2-201ENST00000383865 132 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 RNU6-1080P-201ENST00000383982 107 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 MIR518D-201ENST00000385014 87 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 PTENP1-201ENST00000447117 1215 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 RPL37P6-201ENST00000460682 294 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 RPL7P43-201ENST00000478876 753 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC093852.1-201ENST00000503587 266 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.2□□□□□ -2.22
TRIM4Q9C037 RPL30P11-203ENST00000598995 310 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 AL445435.1-201ENST00000604232 665 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 MIR98-201ENST00000606724 119 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 AC021755.4-201ENST00000616620 456 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM4Q9C037 DDX43P2-201ENST00000604753 1354 ntBASIC1.2□□□□□ -2.22
TRIM4Q9C037 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRIM4Q9C037 CBX3P1-201ENST00000325243 554 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRIM4Q9C037 RNU6-188P-201ENST00000364207 107 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 RNU6-1122P-201ENST00000384449 107 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC005908.1-201ENST00000468701 347 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 RNU5B-3P-201ENST00000516601 115 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 RN7SKP258-201ENST00000517151 304 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 RNU6-586P-201ENST00000517265 104 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC023538.1-201ENST00000534576 736 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 CLIC4P2-201ENST00000601934 717 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC107952.2-201ENST00000606048 486 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 RNU6-91P-201ENST00000607774 107 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC013470.4-201ENST00000619978 986 ntBASIC1.19□□□□□ -2.22
TRIM4Q9C037 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
TRIM4Q9C037 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRIM4Q9C037 Y_RNA.68-201ENST00000362881 102 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 SNORA62.1-201ENST00000364287 154 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 Y_RNA.251-201ENST00000364551 99 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AC008267.5-201ENST00000424928 265 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 AC092634.2-201ENST00000428146 1010 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 SNRPFP3-201ENST00000457792 225 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 MEMO1P3-201ENST00000459811 302 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 RN7SKP49-201ENST00000516675 260 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 AP000763.2-201ENST00000540641 163 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 AC010900.2-201ENST00000604508 210 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 AC091965.5-201ENST00000624785 342 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
TRIM4Q9C037 ZNF680P1-201ENST00000436625 1469 ntBASIC1.18□□□□□ -2.22
TRIM4Q9C037 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms