Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC032011.1-201ENST00000611703 1549 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 RNU1-140P-201ENST00000365040 165 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 MIR606-201ENST00000384851 96 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 MCFD2P1-201ENST00000417812 300 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 PTGES3P4-201ENST00000426243 356 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 MTND4P19-201ENST00000446659 478 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AP001025.1-201ENST00000486139 332 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AF213884.1-201ENST00000488102 463 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC097462.2-201ENST00000504623 481 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC099522.1-202ENST00000514718 367 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AP000889.1-201ENST00000530968 660 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC022655.2-201ENST00000577280 318 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC006504.6-201ENST00000590142 199 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AL360085.1-201ENST00000604713 532 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC007485.1-201ENST00000616755 206 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC091925.1-201ENST00000623204 462 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 AC010889.1-201ENST00000566193 2666 ntBASIC3.97□□□□□ -1.77
TRIM55Q9BYV6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
TRIM55Q9BYV6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM55Q9BYV6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 Y_RNA.422-201ENST00000384054 114 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 Y_RNA.428-201ENST00000384078 102 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 RNU6-19P-201ENST00000384718 107 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 RNU6-750P-201ENST00000390946 107 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 RNA5SP44-201ENST00000410446 133 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC096649.2-201ENST00000416186 393 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 MRPS18CP6-201ENST00000423587 223 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AL031659.1-201ENST00000447075 539 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC012308.1-201ENST00000451232 178 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 HMGN1P10-201ENST00000474557 553 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 MIR4444-1-201ENST00000581696 74 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 MIR4444-2-201ENST00000584390 74 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC083806.3-201ENST00000614016 455 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 AC009541.1-201ENST00000438279 2662 ntBASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM55Q9BYV6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 RBBP8P1-201ENST00000449447 1844 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 RNU6-595P-201ENST00000363944 107 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 RNU6-99P-201ENST00000364721 107 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 RNY1P14-201ENST00000384426 108 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 RNU4-6P-201ENST00000410804 122 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 MTND2P23-201ENST00000422990 651 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AC006011.1-201ENST00000442758 349 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 GSTA11P-201ENST00000452866 669 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 SNORD59.2-201ENST00000516873 68 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 SNORD116.3-201ENST00000517176 78 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AC007991.1-201ENST00000522680 631 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AC025281.1-201ENST00000567026 265 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 AL391261.4-201ENST00000616012 481 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM55Q9BYV6 MAPK10-322ENST00000641485 4530 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 SNORD32A-201ENST00000364805 84 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 RNU6-487P-201ENST00000365430 104 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 RNU6-639P-201ENST00000384074 107 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 MIR591-201ENST00000385290 95 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 HLFP1-201ENST00000402375 499 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC108032.1-201ENST00000416706 207 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 HMGB1P37-201ENST00000439613 609 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC099799.1-201ENST00000439809 192 ntBASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM55Q9BYV6 AC107626.1-201ENST00000471084 183 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms