Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AL022345.1-201ENST00000607292 135 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AC004067.1-201ENST00000608733 700 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AF129408.1-201ENST00000608767 431 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SCAPERQ9BY12 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SCAPERQ9BY12 RNU1-23P-201ENST00000363361 144 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 RNU6-968P-201ENST00000384076 107 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.56□□□□□ -2.32
SCAPERQ9BY12 HMGN1P10-201ENST00000474557 553 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AC108729.1-201ENST00000487812 947 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.56□□□□□ -2.32
SCAPERQ9BY12 SNORD116-28-201ENST00000516123 91 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.56□□□□□ -2.32
SCAPERQ9BY12 SNORA77B-201ENST00000578179 125 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 MIR4661-201ENST00000582720 75 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AL713866.2-201ENST00000603579 219 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AC069304.2-201ENST00000605154 435 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 AC024257.5-201ENST00000612739 531 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 MIR6718-201ENST00000616153 80 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
SCAPERQ9BY12 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
SCAPERQ9BY12 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC069282.1-201ENST00000411911 526 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 USP9YP33-201ENST00000412220 421 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 RPL31P54-201ENST00000429803 370 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC027119.1-201ENST00000440877 241 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 PGBD4P5-201ENST00000445958 426 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 RPL21P47-201ENST00000483696 477 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC079140.2-201ENST00000506193 142 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 SNORA25.11-201ENST00000515935 105 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 RNU6-667P-201ENST00000517186 102 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 COPS8P3-201ENST00000526024 482 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 RNU1-58P-201ENST00000362413 163 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 MIR506-201ENST00000384998 124 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 MTND5P8-201ENST00000449817 1083 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC114982.1-201ENST00000469402 321 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 PSMC1P5-201ENST00000512850 177 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 SCARNA16.2-201ENST00000516520 172 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AP003327.1-201ENST00000529684 127 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 ROCK1P1-201ENST00000573767 549 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.55□□□□□ -2.32
SCAPERQ9BY12 BBIP1P1-201ENST00000602999 279 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AL109620.1-201ENST00000618738 1197 ntBASIC0.55□□□□□ -2.32
SCAPERQ9BY12 AC092125.1-201ENST00000562568 1995 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 SEC63P2-201ENST00000503863 1939 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 MIR302D-201ENST00000362275 68 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 SNORD33-201ENST00000362761 85 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 RNU6-778P-201ENST00000363269 103 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 SNORA48.1-201ENST00000390879 135 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 AC127391.1-201ENST00000411737 98 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 CCDC58P2-201ENST00000417131 366 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 NCOR1P3-201ENST00000420479 303 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 AC139712.2-201ENST00000424302 339 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 SKA2P1-201ENST00000425592 390 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 PTGES3P4-201ENST00000426243 356 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.54□□□□□ -2.32
SCAPERQ9BY12 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.54□□□□□ -2.32
SCAPERQ9BY12 AC012213.3-201ENST00000577199 777 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.54□□□□□ -2.32
SCAPERQ9BY12 VN1R88P-201ENST00000596787 292 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 AC073544.2-201ENST00000601155 540 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 U2.21-201ENST00000637295 81 ntBASIC0.54□□□□□ -2.32
SCAPERQ9BY12 RNU6-673P-201ENST00000365084 104 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 RNU6-878P-201ENST00000384578 110 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 MIR1262-201ENST00000408276 93 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 MIR1267-201ENST00000408723 78 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 PPP1R11P2-201ENST00000423543 382 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 AL591704.1-201ENST00000432574 275 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 AL353706.1-201ENST00000436728 494 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.53□□□□□ -2.32
SCAPERQ9BY12 AL441985.1-201ENST00000457727 251 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SCAPERQ9BY12 RPL30P6-201ENST00000475925 342 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.53□□□□□ -2.32
SCAPERQ9BY12 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 BNIP3P27-201ENST00000599991 412 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 AC011939.3-201ENST00000613686 466 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 AL590396.2-201ENST00000636511 1041 ntBASIC0.53□□□□□ -2.32
SCAPERQ9BY12 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 MTCO1P56-201ENST00000401674 224 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 MIR1302-8-201ENST00000408342 128 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 PSMA6P3-201ENST00000428242 164 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 RAP1BP2-201ENST00000478270 544 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 SNORA31.17-201ENST00000516953 127 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 RNA5SP337-201ENST00000517007 109 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.52□□□□□ -2.33
SCAPERQ9BY12 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.52□□□□□ -2.33
SCAPERQ9BY12 AL139344.1-201ENST00000605228 195 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms