Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MTND4LP22-201ENST00000508209 276 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AP000889.1-201ENST00000530968 660 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 MIR5188-201ENST00000583467 113 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AL158827.2-201ENST00000602494 330 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AC008121.1-201ENST00000603244 268 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AC016727.2-201ENST00000603988 621 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AC100812.1-201ENST00000607622 580 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AL021879.1-201ENST00000611756 288 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AL691447.3-201ENST00000635020 330 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 U6.99-201ENST00000637524 83 ntBASIC3.53□□□□□ -1.84
NDC1Q9BTX1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDC1Q9BTX1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.53□□□□□ -1.84
NDC1Q9BTX1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 FTLP6-201ENST00000355274 422 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 SNORA63.7-201ENST00000365579 123 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 RNU6-217P-201ENST00000384164 104 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.533-201ENST00000384596 114 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.556-201ENST00000384677 113 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 RPS15AP10-201ENST00000432472 382 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 RPL23AP83-201ENST00000434984 473 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC133134.1-201ENST00000466800 359 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 RPL23AP45-201ENST00000476406 468 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 TRBV12-2-201ENST00000489763 344 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC104619.4-201ENST00000510773 249 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC109479.2-201ENST00000517842 174 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 MIR4782-201ENST00000577987 79 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 SRGNP1-201ENST00000603392 451 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC009314.1-201ENST00000603871 304 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 Z98751.3-201ENST00000604447 521 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 RNU1-30P-201ENST00000606575 163 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 FTX_3.1-201ENST00000610451 147 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 U2.1-201ENST00000618978 145 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AP000553.6-201ENST00000641242 118 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC022336.2-201ENST00000568966 2538 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 FAM35BP-202ENST00000497389 3337 ntBASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.52□□□□□ -1.85
NDC1Q9BTX1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.152-201ENST00000363578 100 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.210-201ENST00000364161 110 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 RNA5SP51-201ENST00000364750 119 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.476-201ENST00000384347 108 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MIR521-1-201ENST00000384902 87 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AL591034.2-201ENST00000402839 359 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AL138878.1-201ENST00000405131 347 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MIR1252-201ENST00000408861 65 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 RPS29P4-201ENST00000414733 161 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 HMGN2P31-201ENST00000432430 273 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 SNORD105B-201ENST00000458770 79 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 RNU7-169P-201ENST00000459456 61 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 SNORA40.14-201ENST00000516543 86 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC103996.1-201ENST00000555468 102 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC244505.7-201ENST00000599675 272 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC012468.1-201ENST00000604888 430 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 BRDTP1-201ENST00000605735 677 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MIR1244-1-201ENST00000612829 85 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC107871.2-201ENST00000612894 502 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AL110115.1-201ENST00000614396 364 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 HMGB1P24-202ENST00000615653 685 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AL138825.1-201ENST00000618587 192 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AC027309.3-201ENST00000623419 351 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MIR1244-3-201ENST00000635744 85 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MIR1244-2-201ENST00000636449 85 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 MIR1244-4-202ENST00000636813 85 ntBASIC3.51□□□□□ -1.85
NDC1Q9BTX1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms