Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FTH1P15-201ENST00000406984 280 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RNU4-62P-201ENST00000410125 130 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC068533.2-201ENST00000411872 306 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 C8orf59P1-201ENST00000429930 303 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 UBE2V1P8-201ENST00000437166 265 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 JTBP1-201ENST00000441314 247 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 MTND1P31-201ENST00000449206 961 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 BTF3P15-201ENST00000455606 336 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 snoU13.14-201ENST00000459372 104 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RPL39P28-201ENST00000465655 155 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RPL30P1-201ENST00000488676 339 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RPL39P36-201ENST00000490784 156 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC108078.1-201ENST00000508073 725 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 SNORD116-28-201ENST00000516123 91 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RNA5SP458-201ENST00000516188 119 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 RNU7-40P-201ENST00000516397 64 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AL133153.1-201ENST00000557756 303 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC012360.2-201ENST00000609349 391 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 AC023158.2-201ENST00000614876 543 ntBASIC0.65□□□□□ -2.31
LIMD2Q9BT23 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU5B-1-201ENST00000363286 116 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 Y_RNA.140-201ENST00000363474 103 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-112P-201ENST00000363599 104 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-288P-201ENST00000363690 104 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNA5SP493-201ENST00000364115 91 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-1187P-201ENST00000364771 110 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-207P-201ENST00000384137 107 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-14P-201ENST00000384630 106 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 SNORA40C-201ENST00000391285 128 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 MIR1267-201ENST00000408723 78 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU2-42P-201ENST00000410697 113 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RPS6P15-201ENST00000431996 751 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 USP9YP17-201ENST00000444617 696 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-333P-201ENST00000459117 107 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RPS3AP22-201ENST00000488297 769 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC104629.1-201ENST00000494226 508 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC093259.1-201ENST00000509755 300 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 RNU6-1225P-201ENST00000516336 65 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 MTCO3P15-201ENST00000526563 574 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC005786.1-201ENST00000588553 154 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC069545.1-201ENST00000605671 358 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 Z82243.1-201ENST00000609432 473 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AL078604.3-201ENST00000615580 211 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AP000676.3-201ENST00000623299 569 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 AC099654.9-201ENST00000637055 678 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 MIR3529-201ENST00000637713 78 ntBASIC0.64□□□□□ -2.31
LIMD2Q9BT23 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LIMD2Q9BT23 DDX43P2-201ENST00000604753 1354 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU6-414P-201ENST00000363705 104 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU1-124P-201ENST00000363861 145 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU6-354P-201ENST00000383862 107 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU6-610P-201ENST00000384264 107 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU6-296P-201ENST00000384608 107 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 MIR764-201ENST00000390811 85 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU6-360P-201ENST00000390944 104 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 SNRPEP10-201ENST00000420249 274 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 EIF1P1-201ENST00000421436 341 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC108667.1-201ENST00000428618 249 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 ELOCP30-201ENST00000447108 299 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 MTND2P3-201ENST00000452458 470 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 MTND2P30-201ENST00000456663 382 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNU6-572P-201ENST00000516724 80 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RNA5SP404-201ENST00000517118 132 ntBASIC0.63□□□□□ -2.31
LIMD2Q9BT23 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.63□□□□□ -2.31
LIMD2Q9BT23 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms