Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 AC105245.1-201ENST00000581934 244 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 MIR4325-201ENST00000583049 90 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 MIR4424-201ENST00000585257 86 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 YWHAEP7-203ENST00000622054 312 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HERPUD2Q9BSE4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 SNORD56.1-201ENST00000362913 68 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 RNA5SP374-201ENST00000362939 125 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AL096701.2-201ENST00000416920 238 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 USP9YP27-201ENST00000418455 438 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 DYNLL1P5-201ENST00000467158 270 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC018437.1-201ENST00000492214 406 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC091885.1-201ENST00000506658 268 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 SMURF2P1-201ENST00000514992 481 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-377P-201ENST00000515965 102 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 SNORA25.17-201ENST00000517184 124 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC109479.2-201ENST00000517842 174 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC010186.2-204ENST00000537668 439 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AL157687.1-201ENST00000554853 619 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AP001094.1-201ENST00000579805 193 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AL160281.1-201ENST00000605307 311 ntBASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HERPUD2Q9BSE4 AC008264.2-201ENST00000610193 3731 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-82P-201ENST00000363970 107 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 SNORD15B-201ENST00000384714 146 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-220P-201ENST00000390919 107 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-648P-201ENST00000410190 107 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 ARL5AP1-201ENST00000418991 388 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC080013.2-201ENST00000460866 323 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC117440.1-201ENST00000474107 571 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RPL7P43-201ENST00000478876 753 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RPL21P99-201ENST00000480369 423 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RN7SL633P-201ENST00000488974 297 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RN7SL283P-201ENST00000489055 303 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 CCDC34P1-201ENST00000507441 517 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC091826.1-201ENST00000514065 313 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 SNORD60.2-201ENST00000516883 86 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 CYCSP27-201ENST00000527643 293 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC078899.3-201ENST00000599065 212 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AC005000.2-201ENST00000605468 310 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 AL121917.1-203ENST00000605534 577 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 U4.7-201ENST00000638126 106 ntBASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.12□□□□□ -1.91
HERPUD2Q9BSE4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 Y_RNA.9-201ENST00000362354 101 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-38P-201ENST00000384085 107 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 Y_RNA.516-201ENST00000384541 124 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RNA5SP390-201ENST00000410191 113 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 Z92545.1-201ENST00000411782 234 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 NUP35P1-201ENST00000422734 947 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 MTND3P16-201ENST00000452205 344 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-333P-201ENST00000459117 107 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC133134.1-201ENST00000466800 359 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RPL23AP45-201ENST00000476406 468 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RPS29P2-201ENST00000479278 136 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-189P-201ENST00000516120 101 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 SNORA31.23-201ENST00000517219 133 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 CENPUP1-201ENST00000526649 1202 ntBASIC3.11□□□□□ -1.91
HERPUD2Q9BSE4 AK6P1-201ENST00000540219 478 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms