Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 RPL23AP49-201ENST00000492925 468 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 RNU1-103P-201ENST00000516502 125 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 SNORA43.2-201ENST00000516652 128 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-1212P-201ENST00000517023 104 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AC079587.1-201ENST00000603846 277 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AL356218.2-201ENST00000605264 187 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AC037487.3-201ENST00000606668 112 ntBASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM56Q9BRZ2 AC007656.2-201ENST00000624902 4547 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 Y_RNA.44-201ENST00000362676 108 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-527P-201ENST00000363425 104 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 RNU1-73P-201ENST00000383971 164 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 RPL23AP52-201ENST00000439311 478 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL353705.4-201ENST00000449661 238 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AC084357.1-201ENST00000473404 255 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 PARP1P2-201ENST00000556806 195 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AC120057.2-201ENST00000571520 271 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 Z83818.1-201ENST00000603584 150 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL356157.2-201ENST00000605122 111 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 AL672296.1-201ENST00000427780 2158 ntBASIC4.36□□□□□ -1.71
TRIM56Q9BRZ2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-843P-201ENST00000384454 104 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-102P-201ENST00000384485 104 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-658P-201ENST00000384606 106 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 MIR518D-201ENST00000385014 87 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 MIR3065-201ENST00000390137 79 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RN7SKP177-201ENST00000410567 355 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 NUTF2P7-201ENST00000453086 375 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RN7SKP122-201ENST00000515923 296 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 MIR4277-201ENST00000578298 84 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 AC012468.1-201ENST00000604888 430 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 RPL23AP88-201ENST00000605759 454 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 AC011476.5-201ENST00000615594 130 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 AL592182.3-201ENST00000642132 3304 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 MAPK10-253ENST00000641010 4072 ntBASIC4.35□□□□□ -1.71
TRIM56Q9BRZ2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 RNU6-222P-201ENST00000362438 107 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 Z98749.2-208ENST00000381646 500 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 MIR153-2-201ENST00000385225 87 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 RPL21P17-201ENST00000397467 475 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 RAB9AP3-201ENST00000412737 573 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 CRYBB2P1-203ENST00000415709 538 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC016700.2-201ENST00000446011 156 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 RAB9AP1-201ENST00000449393 573 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 HSPE1P25-201ENST00000455484 251 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 COX6CP14-201ENST00000469580 174 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 RPL23AP75-201ENST00000491601 451 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 UBE2CP3-201ENST00000502715 450 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC024405.2-202ENST00000532731 184 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC016256.1-201ENST00000547971 354 ntBASIC4.34□□□□□ -1.71
TRIM56Q9BRZ2 AC107016.1-201ENST00000550463 337 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms