Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC009518.2-201ENST00000418056 731 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC083875.1-201ENST00000419509 405 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 Z95118.1-201ENST00000421372 247 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 MTCYBP32-201ENST00000427945 1084 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC092634.2-201ENST00000428146 1010 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 MTCO1P3-201ENST00000429327 192 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 PGBD4P5-201ENST00000445958 426 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 MTND2P24-201ENST00000453434 806 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 MTCO3P2-201ENST00000457365 171 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.55□□□□□ -2.32
ABCA3Q99758 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 AP006587.4-201ENST00000526053 529 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC125611.1-201ENST00000549563 229 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
ABCA3Q99758 FAM157A-202ENST00000615155 405 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 uc_338.22-201ENST00000622722 187 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC099654.5-201ENST00000636479 350 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
ABCA3Q99758 RNU6-152P-201ENST00000384037 107 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 SNORA50A-201ENST00000384225 134 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 MIR506-201ENST00000384998 124 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 RNA5SP501-201ENST00000410990 112 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 RPL21P24-201ENST00000413752 448 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AL606489.2-201ENST00000433886 234 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 RPL21P47-201ENST00000483696 477 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 ACA64.5-201ENST00000516207 127 ntBASIC0.55□□□□□ -2.32
ABCA3Q99758 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA3Q99758 AC127391.1-201ENST00000411737 98 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 AC069282.1-201ENST00000411911 526 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA3Q99758 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.54□□□□□ -2.32
ABCA3Q99758 AC091435.1-201ENST00000505442 584 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 AC021171.1-201ENST00000603137 706 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 AC083865.1-201ENST00000636634 831 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 AC092125.1-201ENST00000562568 1995 ntBASIC0.54□□□□□ -2.32
ABCA3Q99758 RNU6-414P-201ENST00000363705 104 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 MIR100-201ENST00000385259 80 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 RNU6-564P-201ENST00000410983 104 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 AC010099.3-201ENST00000423896 409 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA3Q99758 SNORD124-201ENST00000459577 104 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 AC025465.3-201ENST00000510570 311 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 SMURF2P1-201ENST00000514992 481 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 AP003034.1-201ENST00000534621 422 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA3Q99758 AC073544.2-201ENST00000601155 540 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 AC079610.2-201ENST00000604818 690 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 MIR6718-201ENST00000616153 80 ntBASIC0.53□□□□□ -2.32
ABCA3Q99758 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
ABCA3Q99758 MIR1302-8-201ENST00000408342 128 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 SNORA31.17-201ENST00000516953 127 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.52□□□□□ -2.33
ABCA3Q99758 AC021739.1-201ENST00000559631 174 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AL713866.2-201ENST00000603579 219 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AC027335.2-201ENST00000624030 375 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA3Q99758 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA3Q99758 AL591034.2-201ENST00000402839 359 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 MRPL35P1-201ENST00000404272 572 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 RNA5SP100-201ENST00000410903 110 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 RNA5SP59-201ENST00000410922 110 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA3Q99758 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.52□□□□□ -2.33
ABCA3Q99758 SNORA25.11-201ENST00000515935 105 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AC002400.1-201ENST00000569310 726 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AC012213.3-201ENST00000577199 777 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA3Q99758 AC004067.1-201ENST00000608733 700 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AC024257.5-201ENST00000612739 531 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA3Q99758 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 MIR4275-201ENST00000636486 87 ntBASIC0.52□□□□□ -2.33
ABCA3Q99758 AL121978.1-201ENST00000402778 359 ntBASIC0.51□□□□□ -2.33
ABCA3Q99758 AL117342.1-201ENST00000404861 406 ntBASIC0.51□□□□□ -2.33
ABCA3Q99758 HSPE1P13-201ENST00000451143 297 ntBASIC0.51□□□□□ -2.33
ABCA3Q99758 AC010409.1-201ENST00000487382 476 ntBASIC0.51□□□□□ -2.33
ABCA3Q99758 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.51□□□□□ -2.33
ABCA3Q99758 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.51□□□□□ -2.33
ABCA3Q99758 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.51□□□□□ -2.33
ABCA3Q99758 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.51□□□□□ -2.33
ABCA3Q99758 TRAV32-201ENST00000553993 340 ntBASIC0.51□□□□□ -2.33
ABCA3Q99758 U2.21-201ENST00000637295 81 ntBASIC0.51□□□□□ -2.33
ABCA3Q99758 SNORD115-3-201ENST00000363100 82 ntBASIC0.5□□□□□ -2.33
ABCA3Q99758 Y_RNA.136-201ENST00000363444 102 ntBASIC0.5□□□□□ -2.33
ABCA3Q99758 SNORA25-201ENST00000384384 134 ntBASIC0.5□□□□□ -2.33
ABCA3Q99758 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA3Q99758 AC018868.1-201ENST00000491307 315 ntBASIC0.5□□□□□ -2.33
ABCA3Q99758 TRBVA-201ENST00000498804 316 ntBASIC0.5□□□□□ -2.33
ABCA3Q99758 AC012414.6-201ENST00000568241 401 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms