Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.04□□□□□ -2.08
NPAS2Q99743 AC136619.2-201ENST00000563361 631 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 MIR4524B-201ENST00000581569 115 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NPAS2Q99743 AC002984.1-201ENST00000591692 448 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 AC012065.4-201ENST00000602445 679 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 AL158827.2-201ENST00000602494 330 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 BNIP3P10-201ENST00000605360 577 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.04□□□□□ -2.08
NPAS2Q99743 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 AL359547.2-201ENST00000615810 418 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 AC008121.3-201ENST00000618726 433 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 AL691447.3-201ENST00000635020 330 ntBASIC2.04□□□□□ -2.08
NPAS2Q99743 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NPAS2Q99743 MIR412-201ENST00000362142 91 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 RNU4-21P-201ENST00000362802 126 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 SNORA75B-201ENST00000384053 137 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 SNORA67.3-201ENST00000384366 140 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 SNORA26.8-201ENST00000391306 124 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AL133475.1-201ENST00000404414 305 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.03□□□□□ -2.08
NPAS2Q99743 CYCSP46-201ENST00000423569 204 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 SRIP2-201ENST00000428470 166 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.03□□□□□ -2.08
NPAS2Q99743 NDUFB1P2-201ENST00000449477 176 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 USP9YP12-201ENST00000450481 570 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 RPS27AP8-201ENST00000452665 445 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.03□□□□□ -2.08
NPAS2Q99743 RNA5SP337-201ENST00000517007 109 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.03□□□□□ -2.08
NPAS2Q99743 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 OSBPL9P5-201ENST00000542581 171 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.03□□□□□ -2.08
NPAS2Q99743 AC112191.3-201ENST00000604371 277 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC092140.2-201ENST00000618027 521 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC010378.1-201ENST00000619270 362 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC022079.1-201ENST00000621546 602 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 AC024940.5-201ENST00000622889 474 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 MIR3529-201ENST00000637713 78 ntBASIC2.03□□□□□ -2.08
NPAS2Q99743 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.09
NPAS2Q99743 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NPAS2Q99743 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 SNORD56.2-201ENST00000363242 71 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 RNU6-487P-201ENST00000365430 104 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.02□□□□□ -2.09
NPAS2Q99743 MIR561-201ENST00000385216 97 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 Y_RNA.623-201ENST00000411128 95 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AL365338.1-201ENST00000422282 858 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AC007283.2-201ENST00000424739 197 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.02□□□□□ -2.09
NPAS2Q99743 USP9YP8-201ENST00000441913 500 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AL583843.1-201ENST00000456070 346 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.02□□□□□ -2.09
NPAS2Q99743 MED28P2-201ENST00000475771 317 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 MTAPP1-201ENST00000489154 819 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AC092436.1-201ENST00000506450 503 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
NPAS2Q99743 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AC092325.1-201ENST00000566449 554 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.02□□□□□ -2.09
NPAS2Q99743 MIR4769-201ENST00000584126 77 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 HMGN1P30-201ENST00000589286 268 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC007229.1-201ENST00000590455 412 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC009314.1-201ENST00000603871 304 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 RNU6-87P-201ENST00000607561 108 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC012360.2-201ENST00000609349 391 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC138749.5-201ENST00000611461 208 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC116165.2-201ENST00000616705 206 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.02□□□□□ -2.09
NPAS2Q99743 AC078883.4-201ENST00000623218 367 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 AC099654.13-201ENST00000639774 207 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 HAUS6P2-201ENST00000433254 2404 ntBASIC2.02□□□□□ -2.09
NPAS2Q99743 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPAS2Q99743 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPAS2Q99743 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPAS2Q99743 RNU6-1010P-201ENST00000362757 107 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 RNU4-1-201ENST00000363925 141 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 RNU5A-2P-201ENST00000384337 116 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 RNU6-843P-201ENST00000384454 104 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.01□□□□□ -2.09
NPAS2Q99743 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
NPAS2Q99743 AC016831.2-201ENST00000417179 352 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms