Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TIMP4Q99727 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.28□□□□□ -1.88
TIMP4Q99727 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
TIMP4Q99727 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TIMP4Q99727 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 Y_RNA.245-201ENST00000364493 95 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 RNU6-384P-201ENST00000364900 104 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 RNU6-596P-201ENST00000365395 98 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 Y_RNA.380-201ENST00000365663 111 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TIMP4Q99727 RNU6-784P-201ENST00000384330 106 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 Y_RNA.533-201ENST00000384596 114 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 Y_RNA.556-201ENST00000384677 113 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 Y_RNA.577-201ENST00000384794 101 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR521-1-201ENST00000384902 87 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TIMP4Q99727 AL592148.1-201ENST00000413568 445 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 CRYBB2P1-203ENST00000415709 538 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.28□□□□□ -1.88
TIMP4Q99727 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.28□□□□□ -1.88
TIMP4Q99727 RPS3AP12-201ENST00000443616 753 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
TIMP4Q99727 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.28□□□□□ -1.88
TIMP4Q99727 CECR9-201ENST00000453421 199 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.28□□□□□ -1.88
TIMP4Q99727 RNU6-1037P-201ENST00000459571 107 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AL359273.1-201ENST00000510918 627 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 Y_RNA.687-201ENST00000516558 91 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AC084851.1-201ENST00000529105 249 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR4425-201ENST00000580572 84 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR1244-1-201ENST00000612829 85 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 RMST_4.1-201ENST00000616886 107 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AL360181.4-201ENST00000621752 134 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AC138627.2-201ENST00000624202 601 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR1244-3-201ENST00000635744 85 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR1244-2-201ENST00000636449 85 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 MIR1244-4-202ENST00000636813 85 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 MAPK10-373ENST00000641983 6772 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 AC008669.1-201ENST00000565823 2178 ntBASIC3.28□□□□□ -1.88
TIMP4Q99727 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.28□□□□□ -1.88
TIMP4Q99727 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL021368.2-201ENST00000606125 5352 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TIMP4Q99727 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.27□□□□□ -1.89
TIMP4Q99727 SNORA63.1-201ENST00000362493 131 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RNU6-379P-201ENST00000363813 104 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RNU4-42P-201ENST00000364738 142 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 Y_RNA.307-201ENST00000365022 117 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 SNORD6-201ENST00000365444 73 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RNU6-827P-201ENST00000365553 106 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 Y_RNA.396-201ENST00000383949 103 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TIMP4Q99727 AL138885.1-201ENST00000405921 675 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 MTHFD2P2-201ENST00000407725 247 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 MIR1252-201ENST00000408861 65 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL096701.2-201ENST00000416920 238 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.27□□□□□ -1.89
TIMP4Q99727 OSTCP8-201ENST00000445117 448 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL583843.1-201ENST00000456070 346 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 snoU13.24-201ENST00000458998 104 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 snoU13.22-201ENST00000459428 104 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC133134.1-201ENST00000466800 359 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RPL7P49-201ENST00000471402 708 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC084357.1-201ENST00000473404 255 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL160314.1-201ENST00000490836 438 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RPL22P13-201ENST00000493291 347 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.27□□□□□ -1.89
TIMP4Q99727 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.27□□□□□ -1.89
TIMP4Q99727 SCARNA15.2-201ENST00000516409 127 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RNU6-388P-201ENST00000517012 105 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RNU6-389P-201ENST00000517048 105 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 Y_RNA.715-201ENST00000517082 110 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 RNA5SP290-201ENST00000517133 127 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.27□□□□□ -1.89
TIMP4Q99727 AC025755.1-201ENST00000521306 278 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC040926.1-201ENST00000530195 238 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.27□□□□□ -1.89
TIMP4Q99727 AC006600.1-201ENST00000572529 153 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.27□□□□□ -1.89
TIMP4Q99727 AL158827.2-201ENST00000602494 330 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 MTND4LP5-201ENST00000605152 292 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL021879.1-201ENST00000611756 288 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL442067.1-201ENST00000613261 223 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC084757.4-201ENST00000616350 526 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 AL691447.3-201ENST00000635020 330 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 CEP170P1-201ENST00000502249 4587 ntBASIC3.27□□□□□ -1.89
TIMP4Q99727 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.27□□□□□ -1.89
TIMP4Q99727 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TIMP4Q99727 AC007656.2-201ENST00000624902 4547 ntBASIC3.26□□□□□ -1.89
TIMP4Q99727 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms