Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RNU6-360P-201ENST00000390944 104 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 RNA5SP501-201ENST00000410990 112 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC245047.4-201ENST00000433189 144 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 SNRPEP7-201ENST00000438350 220 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC099513.1-201ENST00000490423 301 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 SNORD116-28-201ENST00000516123 91 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 RNA5SP135-201ENST00000517019 125 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 CYCSP23-201ENST00000519781 313 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC012414.6-201ENST00000568241 401 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AC091152.3-201ENST00000604227 325 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 AL109620.1-201ENST00000618738 1197 ntBASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDK5RAP2Q96SN8 SNORD115-3-201ENST00000363100 82 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-1280P-201ENST00000365211 107 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 RNA5SP193-201ENST00000410353 107 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 RNU2-36P-201ENST00000410361 191 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 RNU2-48P-201ENST00000410694 191 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 AL135790.2-201ENST00000437701 267 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 AC090502.2-201ENST00000549267 280 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 AC125611.1-201ENST00000549563 229 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 AC005951.2-201ENST00000576282 495 ntBASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
CDK5RAP2Q96SN8 RNA5SP62-201ENST00000363457 110 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-1235P-201ENST00000384559 107 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-754P-201ENST00000391166 107 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 MTCO3P1-205ENST00000422088 832 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-498P-201ENST00000459468 107 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 AP003034.1-201ENST00000534621 422 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 AL118556.2-201ENST00000614375 824 ntBASIC0.77□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-529P-201ENST00000363383 104 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 Y_RNA.178-201ENST00000363832 102 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 RNA5SP100-201ENST00000410903 110 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 RNA5SP59-201ENST00000410922 110 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 AC013410.2-201ENST00000422627 201 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 RPL9P9-202ENST00000466501 579 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 AC025465.3-201ENST00000510570 311 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 PTP4A1P4-201ENST00000512479 322 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 AC009237.15-201ENST00000610252 501 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
CDK5RAP2Q96SN8 RNU5E-8P-201ENST00000363502 116 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RPS15AP9-201ENST00000439856 381 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 VN1R10P-201ENST00000447106 875 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RPL21P47-201ENST00000483696 477 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC108078.1-201ENST00000508073 725 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 COPS8P3-201ENST00000526024 482 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC090115.3-201ENST00000553218 849 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-271P-201ENST00000363858 105 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RNU1-36P-201ENST00000365130 165 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-16P-201ENST00000384385 107 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-160P-201ENST00000384591 107 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 SNORD116-23-201ENST00000384645 92 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 MTND1P21-201ENST00000412991 285 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-703P-201ENST00000516946 107 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 MIR3937-201ENST00000580135 106 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC073544.2-201ENST00000601155 540 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 MIR8087-201ENST00000612745 78 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 AC009268.2-201ENST00000621925 457 ntBASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.75□□□□□ -2.29
CDK5RAP2Q96SN8 SNORD33-201ENST00000362761 85 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-1005P-201ENST00000384519 107 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 RN7SKP61-201ENST00000410642 295 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 AC092628.1-201ENST00000436250 252 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 snoU13.9-201ENST00000458927 103 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 RPS26P55-201ENST00000471178 356 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 AL596245.1-201ENST00000618994 362 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 AC012676.2-201ENST00000619258 186 ntBASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDK5RAP2Q96SN8 RNU1-23P-201ENST00000363361 144 ntBASIC0.73□□□□□ -2.29
CDK5RAP2Q96SN8 RNU6-1066P-201ENST00000363573 105 ntBASIC0.73□□□□□ -2.29
CDK5RAP2Q96SN8 AC119751.3-201ENST00000399720 670 ntBASIC0.73□□□□□ -2.29
CDK5RAP2Q96SN8 MTCO1P56-201ENST00000401674 224 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms