Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC098831.1-201ENST00000440661 216 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC104058.1-201ENST00000448028 297 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC027673.1-201ENST00000456245 405 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 RNU7-63P-201ENST00000459054 62 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 snoU13.15-201ENST00000459407 104 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 SRRM1P2-201ENST00000464531 1192 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC082651.2-201ENST00000496833 166 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.85□□□□□ -1.95
NEK1Q96PY6 RNU6-703P-201ENST00000516946 107 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 SNORA31.19-201ENST00000517079 126 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 RPL7P20-201ENST00000520308 745 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.85□□□□□ -1.95
NEK1Q96PY6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC008752.3-201ENST00000588113 712 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AL158827.2-201ENST00000602494 330 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC007621.1-201ENST00000604544 437 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC007938.3-201ENST00000604965 623 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC008945.2-201ENST00000606056 604 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC067747.1-201ENST00000608026 250 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC013562.2-201ENST00000611632 603 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 CTSLP2-204ENST00000629029 392 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AL691447.3-201ENST00000635020 330 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 ZNF658B-202ENST00000615961 3375 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 AC016717.2-201ENST00000609089 5141 ntBASIC2.85□□□□□ -1.95
NEK1Q96PY6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 HSPA8P4-201ENST00000511877 1920 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 Y_RNA.3-201ENST00000362331 103 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 RNU6-550P-201ENST00000391057 101 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC023141.4-201ENST00000412031 328 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC009963.1-201ENST00000417265 157 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 MTCYBP5-201ENST00000423752 1135 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AL596276.1-201ENST00000434465 418 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 BRK1P2-201ENST00000442875 223 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 MTATP6P7-201ENST00000453315 681 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC092436.1-201ENST00000506450 503 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC098591.2-201ENST00000510152 315 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC026436.1-201ENST00000510537 270 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 MIR4703-201ENST00000577728 79 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 MIR4782-201ENST00000577987 79 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 MTATP6P3-201ENST00000581686 676 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 MIR548AC-201ENST00000585049 88 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 AL354950.2-201ENST00000617939 290 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 MIR1291-201ENST00000627649 87 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NEK1Q96PY6 MIR3199-2-201ENST00000636243 86 ntBASIC2.84□□□□□ -1.95
NEK1Q96PY6 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NEK1Q96PY6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
NEK1Q96PY6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 ADAM3A-203ENST00000461344 2157 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NEK1Q96PY6 SNORA3.2-201ENST00000408221 125 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 RN7SKP192-201ENST00000411291 327 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 RPL21P90-201ENST00000415692 466 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 AC000111.3-201ENST00000433478 193 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 PSPHP1-201ENST00000450062 261 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 AL118520.1-201ENST00000450770 291 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 AC022493.1-201ENST00000492984 337 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 AC105417.1-201ENST00000514691 285 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 RNU6-720P-201ENST00000516363 108 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 RNU6-314P-201ENST00000516574 104 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 RNU6-1183P-201ENST00000517054 60 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 AL049779.4-201ENST00000604500 156 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 AP001596.2-201ENST00000608410 312 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 U6.42-201ENST00000618440 107 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 AC068792.1-201ENST00000621354 417 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 AC005609.4-201ENST00000625071 447 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NEK1Q96PY6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.83□□□□□ -1.96
NEK1Q96PY6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.82□□□□□ -1.96
NEK1Q96PY6 RNU6-996P-201ENST00000365438 107 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 RNU6-1179P-201ENST00000384667 107 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 MIR578-201ENST00000384828 96 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 RNU6-750P-201ENST00000390946 107 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 CALM2P3-201ENST00000400429 449 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 AL031779.1-201ENST00000415663 330 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.82□□□□□ -1.96
NEK1Q96PY6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.82□□□□□ -1.96
NEK1Q96PY6 MTCYBP8-201ENST00000422855 651 ntBASIC2.82□□□□□ -1.96
NEK1Q96PY6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms