Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.16-201ENST00000362421 102 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-1266P-201ENST00000362794 105 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-428P-201ENST00000362942 107 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 SNORD50.1-201ENST00000362987 71 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 snoU2_19.2-201ENST00000363024 80 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNA5SP399-201ENST00000364003 117 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNA5SP97-201ENST00000365006 84 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.518-201ENST00000384552 113 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 SNORA48.2-201ENST00000390926 124 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.793-201ENST00000411222 111 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 MTCO1P39-201ENST00000426148 480 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 NDUFB4P10-201ENST00000452541 359 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RN7SKP210-201ENST00000459176 261 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RN7SL271P-201ENST00000487601 295 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 AC025554.1-201ENST00000505641 188 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 SNORA31.6-201ENST00000516241 130 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNU4-71P-201ENST00000516258 113 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNU1-95P-201ENST00000516357 160 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNU5B-3P-201ENST00000516601 115 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RNU1-128P-201ENST00000516704 160 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.706-201ENST00000516933 99 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 AC022868.1-201ENST00000517767 391 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 U6.92-201ENST00000636464 89 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 AC068254.2-201ENST00000623938 3577 ntBASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNGAP1Q96PV0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 MIR335-201ENST00000362173 94 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.180-201ENST00000363867 113 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.200-201ENST00000364018 102 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 SNORA5A-201ENST00000384111 134 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RNVU1-14-201ENST00000384770 164 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RPL21P75-201ENST00000396599 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RPL21P28-201ENST00000401418 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.623-201ENST00000411128 95 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC004552.1-201ENST00000419089 348 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AL590556.1-201ENST00000423231 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RPL21P11-201ENST00000461458 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RPL21P39-201ENST00000463605 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RPS26P3-201ENST00000470205 348 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC090543.2-201ENST00000483963 348 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC004057.1-201ENST00000485827 348 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC132942.1-201ENST00000486753 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC093591.1-201ENST00000491435 481 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RPL21P16-201ENST00000495531 483 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-1338P-201ENST00000516328 91 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 RNA5SP290-201ENST00000517133 127 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC025755.1-201ENST00000521306 278 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 CASP1P1-201ENST00000526345 212 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC084851.1-201ENST00000529105 249 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AL442163.3-201ENST00000554110 156 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 BX284668.6-201ENST00000606899 438 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AC243829.7-201ENST00000633081 225 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 AL592437.2-201ENST00000421655 2434 ntBASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SYNGAP1Q96PV0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 U1.1-201ENST00000384101 164 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 SNORA12.2-201ENST00000391040 156 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 RPL23AP22-201ENST00000437556 453 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 RNU7-175P-201ENST00000515915 61 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-377P-201ENST00000515965 102 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms