Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 RPL23AP63-201ENST00000498752 471 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC117522.2-201ENST00000510049 657 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC116347.2-201ENST00000514912 523 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 Y_RNA.689-201ENST00000516589 107 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 OR5B19P-201ENST00000531766 928 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC135279.1-201ENST00000543493 504 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC025678.1-201ENST00000567861 338 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AP002360.4-201ENST00000606980 481 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AP002782.1-201ENST00000623107 614 ntBASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.78□□□□□ -2.12
ECHDC3Q96DC8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 RNU6-1010P-201ENST00000362757 107 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 RNU6-487P-201ENST00000365430 104 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 RNU6-843P-201ENST00000384454 104 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 RNU6-809P-201ENST00000384461 107 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 MIR561-201ENST00000385216 97 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 NDUFB1P2-201ENST00000449477 176 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 SSXP1-201ENST00000453640 473 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 RPL23AP3-201ENST00000453844 468 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 MED28P2-201ENST00000475771 317 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC104564.1-201ENST00000493028 407 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC109329.1-201ENST00000518744 317 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 MRPS36P3-201ENST00000519284 130 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC034114.1-201ENST00000520293 285 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 MTND2P32-201ENST00000521584 1038 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC011979.2-201ENST00000527568 352 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 OR5AL2P-201ENST00000532185 920 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 NDUFA5P6-201ENST00000542110 379 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC092325.1-201ENST00000566449 554 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 DEFB122-202ENST00000569013 197 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC008751.2-201ENST00000597885 980 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC018638.7-201ENST00000605836 1114 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC098614.4-201ENST00000607601 462 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC092140.2-201ENST00000618027 521 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 AC092656.1-203ENST00000624134 423 ntBASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.77□□□□□ -2.13
ECHDC3Q96DC8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 RNU1-23P-201ENST00000363361 144 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 Y_RNA.623-201ENST00000411128 95 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 SNORD56-201ENST00000413522 71 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AL031779.1-201ENST00000415663 330 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AL365338.1-201ENST00000422282 858 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AL583843.1-201ENST00000456070 346 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 SNORD11.1-201ENST00000459482 85 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AC112204.1-201ENST00000502591 103 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 RNA5SP337-201ENST00000517007 109 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 MIR4419B-201ENST00000577260 68 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 AC096772.1-201ENST00000609146 564 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 HAUS6P2-201ENST00000433254 2404 ntBASIC1.76□□□□□ -2.13
ECHDC3Q96DC8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AC103710.2-202ENST00000641454 2853 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 MIR412-201ENST00000362142 91 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 RNU6-500P-201ENST00000362349 107 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 RNU4-28P-201ENST00000364739 141 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 RNU1-57P-201ENST00000384491 166 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 RPL23AP30-201ENST00000432419 501 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AL645568.3-201ENST00000433683 316 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AL354941.1-201ENST00000438600 464 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 MTND6P13-201ENST00000443510 523 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 Z73417.1-201ENST00000447373 778 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 HMGB1P35-201ENST00000503360 598 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AC020699.1-201ENST00000505161 445 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 CR383656.8-201ENST00000549046 145 ntBASIC1.75□□□□□ -2.13
ECHDC3Q96DC8 MIR3124-201ENST00000582636 67 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms