Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AP004607.1-201ENST00000524456 203 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AL121821.2-201ENST00000556081 394 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 AC063943.3-201ENST00000615562 356 ntBASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHMP4CQ96CF2 RNU6-37P-201ENST00000362692 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-11P-201ENST00000364234 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-7-201ENST00000364784 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-8-201ENST00000365467 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-25P-201ENST00000383873 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-1-201ENST00000383898 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-48P-201ENST00000384161 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-36P-201ENST00000384172 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-4P-201ENST00000384205 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-5P-201ENST00000384238 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-3P-201ENST00000384314 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-16P-201ENST00000384385 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-15P-201ENST00000384534 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-2-201ENST00000384627 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-29P-201ENST00000384637 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-9-201ENST00000384776 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-33P-201ENST00000384793 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 MIR518D-201ENST00000385014 87 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNA5SP354-201ENST00000391247 136 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU2-49P-201ENST00000410666 184 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 MTND3P8-201ENST00000412909 339 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 HIGD1AP2-201ENST00000446367 280 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC092001.1-201ENST00000453012 261 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 PPP1R2P5-201ENST00000457256 603 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC104472.2-201ENST00000469035 601 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC114781.4-201ENST00000513707 639 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-256P-201ENST00000516747 97 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-273P-201ENST00000516937 96 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC006199.1-201ENST00000548728 219 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC025423.5-201ENST00000550230 219 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 RNU6-6P-201ENST00000606623 107 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 Z69720.2-201ENST00000624755 279 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 MTND4P12-201ENST00000498999 1377 ntBASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CHMP4CQ96CF2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC138393.1-203ENST00000327086 343 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 MIR422A-201ENST00000362286 90 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RNU6-799P-201ENST00000363567 107 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RNU6-214P-201ENST00000384130 107 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RN7SKP32-201ENST00000410167 303 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RPL21P40-201ENST00000428586 483 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AL359672.1-201ENST00000442302 409 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RPS12P18-201ENST00000442381 270 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AP001486.1-201ENST00000463339 476 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC109925.1-201ENST00000478069 331 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC008885.1-201ENST00000514930 301 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RNU6-864P-201ENST00000516256 108 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 RNU6-1332P-201ENST00000516666 104 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC025281.1-201ENST00000567026 265 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 MIR5004-201ENST00000579078 107 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 MIR4742-201ENST00000581069 85 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC123912.5-201ENST00000605470 343 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AL022345.1-201ENST00000607292 135 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 CDC27P3-201ENST00000635418 1910 ntBASIC3.7□□□□□ -1.82
CHMP4CQ96CF2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RNA5SP139-201ENST00000364340 117 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RNU6-867P-201ENST00000364956 107 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RNU5E-7P-201ENST00000365290 117 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RNU6-128P-201ENST00000383976 107 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 SNORD15B-201ENST00000384714 146 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 SNORA46-201ENST00000384762 135 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RPL21P3-201ENST00000395517 478 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AL122016.1-201ENST00000403365 367 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC023141.4-201ENST00000412031 328 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 VN1R36P-201ENST00000414936 291 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AL096701.2-201ENST00000416920 238 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC093151.1-201ENST00000427711 313 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms