Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AL121932.1-201ENST00000605542 214 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 MIR3658-201ENST00000636291 56 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-CQ95604 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-CQ95604 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.01□□□□□ -1.61
HLA-CQ95604 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.01□□□□□ -1.61
HLA-CQ95604 AL133383.2-201ENST00000622958 2336 ntBASIC5.01□□□□□ -1.61
HLA-CQ95604 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-CQ95604 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-CQ95604 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-CQ95604 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5□□□□□ -1.61
HLA-CQ95604 GVINP1-202ENST00000531871 7271 ntBASIC5□□□□□ -1.61
HLA-CQ95604 RNU6-622P-201ENST00000384272 103 ntBASIC5□□□□□ -1.61
HLA-CQ95604 CYCSP48-201ENST00000417124 323 ntBASIC5□□□□□ -1.61
HLA-CQ95604 AC019205.3-201ENST00000424573 156 ntBASIC5□□□□□ -1.61
HLA-CQ95604 RN7SL132P-201ENST00000478131 296 ntBASIC5□□□□□ -1.61
HLA-CQ95604 RN7SL810P-201ENST00000493031 276 ntBASIC5□□□□□ -1.61
HLA-CQ95604 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5□□□□□ -1.61
HLA-CQ95604 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5□□□□□ -1.61
HLA-CQ95604 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5□□□□□ -1.61
HLA-CQ95604 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5□□□□□ -1.61
HLA-CQ95604 AL670379.2-201ENST00000604983 252 ntBASIC5□□□□□ -1.61
HLA-CQ95604 AL591034.3-201ENST00000605511 685 ntBASIC5□□□□□ -1.61
HLA-CQ95604 AL391261.4-201ENST00000616012 481 ntBASIC5□□□□□ -1.61
HLA-CQ95604 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5□□□□□ -1.61
HLA-CQ95604 SALL4P2-201ENST00000423288 2910 ntBASIC5□□□□□ -1.61
HLA-CQ95604 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-CQ95604 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5□□□□□ -1.61
HLA-CQ95604 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HLA-CQ95604 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5□□□□□ -1.61
HLA-CQ95604 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HLA-CQ95604 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-CQ95604 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-CQ95604 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 ZNF137P-201ENST00000456718 1920 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-CQ95604 AC010733.2-201ENST00000589496 5702 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-CQ95604 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 SNORA5.1-201ENST00000384275 131 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 RNA5SP187-201ENST00000384400 119 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 RNU1-13P-201ENST00000384499 162 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 AC011998.1-201ENST00000433403 117 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 AC000111.2-201ENST00000448200 210 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 RN7SL542P-201ENST00000467147 294 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-CQ95604 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-CQ95604 MIR5699-201ENST00000578903 90 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 AL451007.1-201ENST00000595491 289 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-CQ95604 MUC2-202ENST00000613187 4845 ntBASIC4.99□□□□□ -1.61
HLA-CQ95604 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-CQ95604 FAM35BP-202ENST00000497389 3337 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-CQ95604 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-CQ95604 AP001273.1-201ENST00000624493 3152 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-CQ95604 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-CQ95604 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-CQ95604 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-CQ95604 SNORA72.4-201ENST00000384174 132 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 SNORA20-201ENST00000384662 132 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RNA5SP372-201ENST00000390836 115 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 SNORA26.5-201ENST00000391215 123 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-CQ95604 RNA5SP317-201ENST00000410176 116 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RNU6-1064P-201ENST00000410626 104 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RNA5SP311-201ENST00000411290 116 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RPL23AP83-201ENST00000434984 473 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 AL450023.3-201ENST00000440592 271 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 AL591623.2-201ENST00000449978 222 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RPL21P126-201ENST00000470049 478 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 CYCTP-201ENST00000504253 315 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RNA5SP315-201ENST00000516340 116 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 RNA5SP312-201ENST00000517068 116 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 AC136777.2-201ENST00000522979 358 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-CQ95604 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-CQ95604 AC011603.4-201ENST00000611325 277 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 MIR492-201ENST00000638676 116 ntBASIC4.98□□□□□ -1.61
HLA-CQ95604 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-CQ95604 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HLA-CQ95604 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-CQ95604 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-CQ95604 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-CQ95604 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-CQ95604 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms