Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.26□□□□□ -2.21
TOPBP1Q92547 RNU11-2P-201ENST00000516898 142 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.26□□□□□ -2.21
TOPBP1Q92547 MTCO3P15-201ENST00000526563 574 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AP005639.2-201ENST00000527592 928 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AP003497.1-201ENST00000528472 562 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC233702.2-202ENST00000562547 291 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AF038458.1-201ENST00000588406 262 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC012467.1-201ENST00000607740 256 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AC092953.2-201ENST00000608000 699 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AP005229.2-201ENST00000609980 697 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 AL109620.1-201ENST00000618738 1197 ntBASIC1.26□□□□□ -2.21
TOPBP1Q92547 NACAP2-201ENST00000318548 624 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-1235P-201ENST00000384559 107 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU2-41P-201ENST00000410991 178 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNA5SP450-201ENST00000411206 102 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 RPL26P27-201ENST00000414397 437 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 UBE2FP1-201ENST00000416536 447 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 PTGES3P4-201ENST00000426243 356 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC244505.3-201ENST00000454598 187 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-498P-201ENST00000459468 107 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 HMGB1P28-201ENST00000507778 552 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 SMURF2P1-201ENST00000514992 481 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-583P-201ENST00000516012 92 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-581P-201ENST00000516214 105 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-390P-201ENST00000516259 103 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-970P-201ENST00000516312 107 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-703P-201ENST00000516946 107 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC006199.1-201ENST00000548728 219 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC098483.2-201ENST00000603158 454 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 DUSP12P1-201ENST00000612874 516 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 TUG1_2.1-201ENST00000614234 87 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC231657.1-201ENST00000624313 397 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TOPBP1Q92547 CDR1-202ENST00000625883 1485 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-207P-201ENST00000384137 107 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-1122P-201ENST00000384449 107 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 RNU6-955P-201ENST00000410497 104 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 MTCO1P3-201ENST00000429327 192 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 MTND6P13-201ENST00000443510 523 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 ARPC3P5-201ENST00000448802 534 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC013267.1-201ENST00000458227 267 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC067942.3-201ENST00000512025 362 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 SNORA4.4-201ENST00000515921 135 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC005786.1-201ENST00000588553 154 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 BBIP1P1-201ENST00000602999 279 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AF129408.1-201ENST00000608767 431 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TOPBP1Q92547 MIR6835-201ENST00000621552 64 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AL445264.1-201ENST00000621719 171 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC004808.1-201ENST00000627671 721 ntBASIC1.25□□□□□ -2.21
TOPBP1Q92547 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 RNU6-1167P-201ENST00000363227 94 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 RNA5SP499-201ENST00000363982 119 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 RPL22P22-201ENST00000395439 379 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 MIR934-201ENST00000401241 83 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 VN1R36P-201ENST00000414936 291 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.24□□□□□ -2.21
TOPBP1Q92547 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 RNU7-136P-201ENST00000458819 69 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 HMGB1P35-201ENST00000503360 598 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 MTND5P13-201ENST00000513046 1079 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 MRPS36P5-201ENST00000551909 298 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 HIGD1AP17-201ENST00000554576 276 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 AC004987.4-201ENST00000603383 338 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 AL031775.1-201ENST00000607014 887 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 AC078880.5-201ENST00000617845 421 ntBASIC1.24□□□□□ -2.21
TOPBP1Q92547 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
TOPBP1Q92547 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 MIR95-201ENST00000385072 81 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 AL449283.1-202ENST00000418249 604 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 GPM6BP2-201ENST00000432046 144 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 RPS15AP9-201ENST00000439856 381 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 MTCO1P53-201ENST00000441633 699 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 GPM6BP1-201ENST00000446387 144 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 RNU6-927P-201ENST00000516199 100 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 SNORA48.11-201ENST00000517015 89 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 CYCSP23-201ENST00000519781 313 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms