Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC091951.2-201ENST00000500762 203 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-256P-201ENST00000516747 97 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 IGHV3-76-201ENST00000522465 295 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AP000889.2-201ENST00000532684 490 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 SCOCP1-201ENST00000554676 349 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 MIR3672-201ENST00000584290 82 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RNU6-6P-201ENST00000606623 107 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 AC010378.1-201ENST00000619270 362 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 MIR3199-2-201ENST00000636243 86 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGB4Q8WW32 MAPK10-362ENST00000641864 4484 ntBASIC3.15□□□□□ -1.91
HMGB4Q8WW32 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 RNU1-100P-201ENST00000365255 165 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 RN7SKP32-201ENST00000410167 303 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 HIGD1AP2-201ENST00000446367 280 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC113155.1-201ENST00000511141 769 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 RNU6-581P-201ENST00000516214 105 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AP005597.4-201ENST00000526762 229 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 TGIF1P1-201ENST00000558095 802 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC026464.5-201ENST00000562497 722 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 OR1M4P-201ENST00000589199 287 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC008121.1-201ENST00000603244 268 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 RMST_7.1-201ENST00000621935 268 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC091564.4-201ENST00000533934 2194 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC008669.1-201ENST00000565823 2178 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
HMGB4Q8WW32 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGB4Q8WW32 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RNU6-942P-201ENST00000363002 107 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RNU6-799P-201ENST00000363567 107 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 Y_RNA.301-201ENST00000364990 103 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 SNORD81.2-201ENST00000365153 76 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RN7SKP220-201ENST00000410611 288 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RNU2-49P-201ENST00000410666 184 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 SNORD56-201ENST00000413522 71 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RPL31P12-201ENST00000422587 358 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AL359672.1-201ENST00000442302 409 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC092001.1-201ENST00000453012 261 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC104472.2-201ENST00000469035 601 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RPL23AP45-201ENST00000476406 468 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RNU6-507P-201ENST00000516045 100 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RNU6-875P-201ENST00000516488 106 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 RNU7-30P-201ENST00000516835 62 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AP004607.1-201ENST00000524456 203 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC025423.5-201ENST00000550230 219 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 DNAJC8P1-201ENST00000554535 372 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AL121821.2-201ENST00000556081 394 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC023043.2-201ENST00000589678 1026 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC005498.1-201ENST00000592125 465 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AL138726.1-201ENST00000614873 333 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC104260.1-201ENST00000616660 539 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 MIR622-201ENST00000638396 96 ntBASIC3.13□□□□□ -1.91
HMGB4Q8WW32 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGB4Q8WW32 AC058791.1-201ENST00000608412 3198 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 MIR22-201ENST00000362190 85 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 Y_RNA.135-201ENST00000363439 95 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RNU6-128P-201ENST00000383976 107 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RNU6-1013P-201ENST00000384180 107 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RPS15AP6-201ENST00000420703 385 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 RPL21P40-201ENST00000428586 483 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGB4Q8WW32 BX679664.1-201ENST00000434429 253 ntBASIC3.12□□□□□ -1.91
HMGB4Q8WW32 MTND4LP16-201ENST00000440828 295 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms