Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNED1Q8TER0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNED1Q8TER0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SNED1Q8TER0 SNORD51-201ENST00000384320 80 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 SNORD37.1-201ENST00000390968 65 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 RNU6-1148P-201ENST00000410992 104 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 UBE2V1P13-201ENST00000436983 439 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 BRK1P2-201ENST00000442875 223 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 MTND3P16-201ENST00000452205 344 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AL356010.1-201ENST00000456364 102 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 PPP1R2P5-201ENST00000457256 603 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 snoU13.8-201ENST00000458890 104 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 RNU6-329P-201ENST00000459618 107 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 RPS15AP36-201ENST00000492022 382 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 RNU4-49P-201ENST00000516080 140 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 RNU6-27P-201ENST00000516146 107 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 RNU6-1095P-201ENST00000516148 108 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AP005597.4-201ENST00000526762 229 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 RANP3-201ENST00000530970 276 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC090615.1-201ENST00000577519 154 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 MIR4742-201ENST00000581069 85 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC060771.1-201ENST00000582031 164 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC099778.2-201ENST00000610904 211 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC009318.2-201ENST00000610917 651 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC130324.3-201ENST00000614165 542 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC079597.1-201ENST00000624306 508 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SNED1Q8TER0 HSPA8P4-201ENST00000511877 1920 ntBASIC2.89□□□□□ -1.95
SNED1Q8TER0 AC010733.2-201ENST00000589496 5702 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 RNU6-97P-201ENST00000363387 104 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 Y_RNA.387-201ENST00000383918 102 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 SNORA1.3-201ENST00000384676 136 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 RNU6-606P-201ENST00000384721 111 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 NDUFB4P5-201ENST00000415445 361 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 MTCYBP8-201ENST00000422855 651 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 UBE2D3P2-201ENST00000424409 445 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 TRIAP1P1-201ENST00000427062 225 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 PSMA6P3-201ENST00000428242 164 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 AL121871.1-201ENST00000443413 436 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC007547.1-201ENST00000462177 490 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 MRPS17P3-201ENST00000465453 385 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC105417.1-201ENST00000514691 285 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 RNU6-1314P-201ENST00000517139 104 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 RN7SKP256-201ENST00000517201 314 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 AL133393.1-201ENST00000603277 287 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC067747.1-201ENST00000608026 250 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC009570.1-201ENST00000609599 745 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AL138880.2-201ENST00000616214 239 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 AC091925.2-201ENST00000625059 256 ntBASIC2.88□□□□□ -1.95
SNED1Q8TER0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SNED1Q8TER0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNED1Q8TER0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNED1Q8TER0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNED1Q8TER0 Y_RNA.132-201ENST00000363421 102 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 RNU5E-8P-201ENST00000363502 116 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 Y_RNA.184-201ENST00000363884 108 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 RNY3P13-201ENST00000365542 102 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 Y_RNA.373-201ENST00000365600 103 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNED1Q8TER0 SNORD21-201ENST00000383953 95 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 MIR606-201ENST00000384851 96 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 U3.20-201ENST00000390909 217 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 Y_RNA.615-201ENST00000410769 117 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 HSPE1P1-201ENST00000421494 318 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNED1Q8TER0 TIMM9P1-201ENST00000436122 256 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC004866.2-201ENST00000438285 481 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AL049714.1-201ENST00000466686 347 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.87□□□□□ -1.95
SNED1Q8TER0 TTC39CP1-201ENST00000512513 755 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 RNU6-548P-201ENST00000517083 115 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 SNRPGP18-201ENST00000553000 214 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 SCOCP1-201ENST00000554676 349 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC020661.2-201ENST00000560114 134 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 MIR3671-201ENST00000580455 88 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC012669.1-201ENST00000603209 283 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC004853.1-201ENST00000604902 698 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC090971.5-201ENST00000621102 293 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 AL159972.1-201ENST00000625150 448 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.87□□□□□ -1.95
SNED1Q8TER0 AC011460.1-201ENST00000636268 1834 ntBASIC2.87□□□□□ -1.95
SNED1Q8TER0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms