Protein–RNA interactions for Protein: Q8NG31

KNL1, Kinetochore scaffold 1, humanhuman

Predictions only

Length 2,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1Q8NG31 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
KNL1Q8NG31 Y_RNA.48-201ENST00000362710 103 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 Y_RNA.324-201ENST00000365165 102 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.18□□□□□ -2.38
KNL1Q8NG31 AL163195.1-201ENST00000496941 348 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 HSPA8P13-201ENST00000523715 472 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 AC009268.1-201ENST00000561352 1203 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 AC012669.1-201ENST00000603209 283 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.18□□□□□ -2.38
KNL1Q8NG31 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 AC009033.1-201ENST00000624279 431 ntBASIC0.18□□□□□ -2.38
KNL1Q8NG31 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.18□□□□□ -2.38
KNL1Q8NG31 FARSBP1-201ENST00000435808 1778 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 RNU4-73P-201ENST00000363164 141 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
KNL1Q8NG31 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.17□□□□□ -2.38
KNL1Q8NG31 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.17□□□□□ -2.38
KNL1Q8NG31 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.17□□□□□ -2.38
KNL1Q8NG31 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
KNL1Q8NG31 VPS26AP1-201ENST00000483197 979 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 RPL21P47-201ENST00000483696 477 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.17□□□□□ -2.38
KNL1Q8NG31 Y_RNA.700-201ENST00000516806 100 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 COPS8P3-201ENST00000526024 482 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.17□□□□□ -2.38
KNL1Q8NG31 AC068620.3-201ENST00000602749 560 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 BBIP1P1-201ENST00000602999 279 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 AL391813.1-201ENST00000603098 260 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 Z83818.1-201ENST00000603584 150 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 DBF4P1-201ENST00000412976 1892 ntBASIC0.17□□□□□ -2.38
KNL1Q8NG31 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC069282.1-201ENST00000411911 526 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC007742.1-201ENST00000425789 329 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AL590383.1-201ENST00000428602 75 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 ELOCP26-201ENST00000436067 329 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 MTND5P8-201ENST00000449817 1083 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC010409.1-201ENST00000487382 476 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 MIR5190-201ENST00000581537 80 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 ZNF663P-202ENST00000641770 1131 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 RPS25P9-201ENST00000435591 252 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 RNA5SP57-201ENST00000459463 123 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC002350.1-201ENST00000490759 375 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 CENPUP1-201ENST00000526649 1202 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC125611.1-201ENST00000549563 229 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC018659.1-201ENST00000551083 169 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 RSL24D1P11-201ENST00000591045 491 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AC006001.4-201ENST00000622243 395 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.16□□□□□ -2.38
KNL1Q8NG31 MTND4P8-201ENST00000514997 1362 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 Z75746.1-201ENST00000440243 2080 ntBASIC0.16□□□□□ -2.38
KNL1Q8NG31 AL135790.2-201ENST00000437701 267 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 AC112492.4-201ENST00000456549 352 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.15□□□□□ -2.38
KNL1Q8NG31 TRBVA-201ENST00000498804 316 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 AC015688.2-201ENST00000584523 262 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 MZT1P2-201ENST00000604387 248 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 MTRNR2L2-201ENST00000604882 87 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 AC105129.3-201ENST00000605455 485 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 Z82243.1-201ENST00000609432 473 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 AC093913.1-201ENST00000614178 329 ntBASIC0.15□□□□□ -2.38
KNL1Q8NG31 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.15□□□□□ -2.38
KNL1Q8NG31 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
KNL1Q8NG31 MIR302D-201ENST00000362275 68 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 RNU6-611P-201ENST00000384276 104 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 RNU6-31P-201ENST00000384388 108 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 RPS3AP36-201ENST00000398190 775 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 AL355615.1-201ENST00000406187 641 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 C1DP1-201ENST00000426049 402 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
KNL1Q8NG31 AC104629.2-201ENST00000468627 598 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
KNL1Q8NG31 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 CYCSP27-201ENST00000527643 293 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 AL022345.2-201ENST00000606307 135 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 MTND4P14-201ENST00000435799 1354 ntBASIC0.15□□□□□ -2.39
KNL1Q8NG31 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.15□□□□□ -2.39
KNL1Q8NG31 SNORD82-201ENST00000365530 70 ntBASIC0.14□□□□□ -2.39
KNL1Q8NG31 Y_RNA.552-201ENST00000384665 112 ntBASIC0.14□□□□□ -2.39
KNL1Q8NG31 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.14□□□□□ -2.39
KNL1Q8NG31 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.14□□□□□ -2.39
KNL1Q8NG31 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.14□□□□□ -2.39
KNL1Q8NG31 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.14□□□□□ -2.39
KNL1Q8NG31 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
KNL1Q8NG31 RPL23AP54-201ENST00000495129 419 ntBASIC0.14□□□□□ -2.39
KNL1Q8NG31 SNORA14.1-201ENST00000516113 141 ntBASIC0.14□□□□□ -2.39
KNL1Q8NG31 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 392.2 ms