Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 UBE2L2-201ENST00000254302 429 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC138393.1-203ENST00000327086 343 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-217P-201ENST00000384164 104 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-140P-201ENST00000384566 108 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-55P-201ENST00000411092 107 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RPS29P31-201ENST00000446147 164 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AL583843.1-201ENST00000456070 346 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC009901.1-201ENST00000506703 541 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 SNORA74D-201ENST00000516404 141 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-388P-201ENST00000517012 105 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-389P-201ENST00000517048 105 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 SNORA70.24-201ENST00000517233 118 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AP005902.1-201ENST00000521358 186 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 BRDTP1-201ENST00000605735 677 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 SNORA62.6-201ENST00000606322 83 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 SNORD58B-201ENST00000607313 66 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 U2.1-201ENST00000618978 145 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.307-201ENST00000365022 117 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-842P-201ENST00000384269 107 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-45P-201ENST00000384471 107 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 SNORA41-201ENST00000384675 132 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 MIR634-201ENST00000385208 97 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 HSPE1P8-201ENST00000406997 288 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-101P-201ENST00000410323 104 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU2-23P-201ENST00000410545 195 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-293P-201ENST00000411259 106 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 MRPS18CP6-201ENST00000423587 223 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AL160275.3-201ENST00000423876 471 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC097713.2-201ENST00000430199 356 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AL645568.3-201ENST00000433683 316 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RPL23AP50-201ENST00000434149 455 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU7-187P-201ENST00000458985 68 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RPS15AP34-201ENST00000487776 387 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-475P-201ENST00000516073 104 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-307P-201ENST00000516743 106 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC005899.2-201ENST00000584353 90 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AL137849.1-201ENST00000604767 169 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC002044.1-201ENST00000606707 158 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC062037.2-201ENST00000610137 73 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 AC004852.3-201ENST00000614131 326 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.53□□□□□ -1.84
SIMC1Q8NDZ2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SIMC1Q8NDZ2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-288P-201ENST00000363690 104 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-266P-201ENST00000364225 107 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-371P-201ENST00000364283 108 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-1303P-201ENST00000364841 107 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RNU6-1026P-201ENST00000384465 108 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 MIR34B-201ENST00000385076 84 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RNU1-101P-201ENST00000391171 127 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 SNORA57.3-201ENST00000411095 141 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC096664.2-201ENST00000411843 406 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 PCNPP5-201ENST00000452246 481 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AL353752.1-201ENST00000454946 260 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC068781.1-201ENST00000488231 618 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC104564.1-201ENST00000493028 407 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 RPL22P13-201ENST00000493291 347 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC107222.1-201ENST00000510899 637 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 APOOP4-201ENST00000513530 597 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AP000867.2-201ENST00000532468 320 ntBASIC3.52□□□□□ -1.85
SIMC1Q8NDZ2 AC008011.1-201ENST00000545989 227 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms