Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU6-6P-201ENST00000606623 107 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 AC107294.3-201ENST00000609211 526 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 uc_338.5-201ENST00000611839 155 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 AL157817.1-201ENST00000614264 790 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 UCA1.1-201ENST00000620952 75 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 SNORA50A-202ENST00000629536 136 ntBASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRPF38AQ8NAV1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 Y_RNA.212-201ENST00000364177 102 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 RNU6-1148P-201ENST00000410992 104 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 RPS4XP2-201ENST00000458402 793 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC107934.2-201ENST00000518653 310 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 COPS8P3-201ENST00000526024 482 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC025423.5-201ENST00000550230 219 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 MIR4742-201ENST00000581069 85 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC024153.1-201ENST00000603103 365 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AL355073.2-201ENST00000612106 557 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC025253.1-201ENST00000613623 543 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 AC063943.3-201ENST00000615562 356 ntBASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.79□□□□□ -1.8
PRPF38AQ8NAV1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 MTND4P12-201ENST00000498999 1377 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 RNU6-1252P-201ENST00000363054 104 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 RNU6-19P-201ENST00000384718 107 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 SNORD56-201ENST00000413522 71 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 UBE2V1P4-201ENST00000425374 344 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 SNAP23P1-201ENST00000433229 246 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC124916.1-201ENST00000444020 547 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC012308.1-201ENST00000451232 178 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 PPP1R2P5-201ENST00000457256 603 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 S100A11P2-201ENST00000467589 312 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 RPL23AP45-201ENST00000476406 468 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC008628.2-201ENST00000502605 298 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 MRPS36P2-201ENST00000512569 299 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 RNU6-1332P-201ENST00000516666 104 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC010186.2-204ENST00000537668 439 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 FAM157A-202ENST00000615155 405 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 RMST_7.1-201ENST00000621935 268 ntBASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PRPF38AQ8NAV1 AC099654.7-201ENST00000635788 2127 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 RNU1-70P-201ENST00000362618 164 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 RNU6-1009P-201ENST00000390996 107 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 Y_RNA.604-201ENST00000410574 102 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AL139396.1-201ENST00000421137 167 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 PTGES3P4-201ENST00000426243 356 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC093151.1-201ENST00000427711 313 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AL353705.1-201ENST00000433468 480 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 RPL23AP22-201ENST00000437556 453 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 RPL27AP5-201ENST00000469428 449 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC092185.1-201ENST00000491371 97 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 RNU6-377P-201ENST00000515965 102 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC026371.1-201ENST00000551867 419 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC023043.2-201ENST00000589678 1026 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC099778.2-201ENST00000610904 211 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 uc_338.1-201ENST00000612113 180 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC135507.2-201ENST00000612443 309 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC011890.2-201ENST00000613393 294 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AC010378.1-201ENST00000619270 362 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 AL353743.1-202ENST00000431724 1695 ntBASIC3.77□□□□□ -1.81
PRPF38AQ8NAV1 MTND5P27-201ENST00000428871 1720 ntBASIC3.76□□□□□ -1.81
PRPF38AQ8NAV1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PRPF38AQ8NAV1 AC138393.1-203ENST00000327086 343 ntBASIC3.76□□□□□ -1.81
PRPF38AQ8NAV1 RNU6-78P-201ENST00000362897 107 ntBASIC3.76□□□□□ -1.81
PRPF38AQ8NAV1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.76□□□□□ -1.81
PRPF38AQ8NAV1 AL356968.1-201ENST00000416622 474 ntBASIC3.76□□□□□ -1.81
PRPF38AQ8NAV1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms