Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 RNU2-10P-201ENST00000516375 211 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AC105185.1-201ENST00000518705 535 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 BNIP3P25-201ENST00000596023 559 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 BNIP3P30-201ENST00000601184 574 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AL158050.2-201ENST00000605336 568 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 uc_338.15-201ENST00000615470 191 ntBASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.38□□□□□ -2.19
ZIC4Q8N9L1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 Y_RNA.46-201ENST00000362695 102 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 SNORD115-3-201ENST00000363100 82 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 RNU6-511P-201ENST00000363496 107 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 RNU6-487P-201ENST00000365430 104 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 RNU5E-6P-201ENST00000365574 115 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 RNU6-843P-201ENST00000384454 104 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 SNORA17.3-201ENST00000391159 129 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 RNU6-757P-201ENST00000410334 100 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC016831.2-201ENST00000417179 352 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AL022400.1-201ENST00000423946 935 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC104058.1-201ENST00000448028 297 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 HMGB1P30-201ENST00000492455 606 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 CYCSP27-201ENST00000527643 293 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC092325.1-201ENST00000566449 554 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AL670379.2-201ENST00000604983 252 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AP000860.1-201ENST00000605250 559 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AL670379.4-201ENST00000605279 254 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC090517.3-201ENST00000625170 141 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 AC103706.2-201ENST00000638080 240 ntBASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.37□□□□□ -2.19
ZIC4Q8N9L1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 RNU6-529P-201ENST00000363383 104 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 RNU6-946P-201ENST00000383878 107 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 POLHP1-201ENST00000411806 470 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 UBE2V1P10-201ENST00000414685 269 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC092648.1-201ENST00000425870 423 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 USP9YP17-201ENST00000444617 696 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AL583843.1-201ENST00000456070 346 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AP004607.1-201ENST00000524456 203 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC011979.2-201ENST00000527568 352 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR4509-3-201ENST00000578671 94 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR4524B-201ENST00000581569 115 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR4307-201ENST00000582802 84 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR4509-2-201ENST00000583920 94 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC144521.1-201ENST00000607148 956 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR15A-201ENST00000607334 83 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 MIR4509-1-201ENST00000618224 94 ntBASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.36□□□□□ -2.19
ZIC4Q8N9L1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 U8.3-201ENST00000363321 132 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 RNU6-960P-201ENST00000364056 120 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 RNU6-546P-201ENST00000383991 107 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 RNU6-611P-201ENST00000384276 104 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 SNORA67.5-201ENST00000391036 107 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AL355143.1-201ENST00000407101 841 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 RNU2-32P-201ENST00000411193 191 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AL365338.1-201ENST00000422282 858 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 EIF4EP2-201ENST00000422816 654 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AL606517.1-201ENST00000446914 387 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 FCF1P6-201ENST00000456841 595 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms